ArticleScientific data2020
CIDO, a community-based ontology for coronavirus disease knowledge and data integration, sharing, and analysis.
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In one paragraph
Article in Scientific data, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 45 papers, 2 of them syntheses that pooled it.
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0cells of the map it votes in
45citing papers in PubMed, 2 pooled it
–field-weighted citation impact
What it found
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
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Who cites it
45 citing papers in PubMed, 2 syntheses or guidelines pooled it.
- Profiling of human lung and gut microbiomes in different conditions of chronic obstructive pulmonary disease using ontology-based evidence synthesis and reasoning.Frontiers in cellular and infection microbiology · 2026Pooled it
- Equitable data sharing in epidemics and pandemics.BMC medical ethics · 2021Pooled it
- Immune biomarkers, profiles, and responses: a vaccine ontology perspective.Journal of biomedical semantics · 2026Article
- Three-layered semantic framework for public health intelligence.Journal of biomedical semantics · 2025Article
- A fourfold pathogen reference ontology suite.Journal of biomedical semantics · 2025Article
- A Fourfold Pathogen Reference Ontology Suite.ArXiv · 2025Article
- Article
- Article
- Metadata harmonization from biological datasets with language models.Bioinformatics advances · 2025Article
- An Ontology to Bridge the Clinical Management of Patients and Public Health Responses for Strengthening Infectious Disease Surveillance: Design Science Study.JMIR formative research · 2024Article
- Knowledge Representation and Management in the Age of Long Covid and Large Language Models: a 2022-2023 Survey.Yearbook of medical informatics · 2024Review
- Searching COVID-19 Clinical Research Using Graph Queries: Algorithm Development and Validation.Journal of medical Internet research · 2024Article
- Homeostasis imbalance process ontology: a study on COVID-19 infectious processes.BMC medical informatics and decision making · 2024Article
- Article
- An open natural language processing (NLP) framework for EHR-based clinical research: a case demonstration using the National COVID Cohort Collaborative (N3C).Journal of the American Medical Informatics Association : JAMIA · 2023Article
- Big knowledge visualization of the COVID-19 CIDO ontology evolution.BMC medical informatics and decision making · 2023Article
- Towards an ML-based semantic IoT for pandemic management: A survey of enabling technologies for COVID-19.Neurocomputing · 2023Article
- Mining of EHR for interface terminology concepts for annotating EHRs of COVID patients.BMC medical informatics and decision making · 2023Article
- Article
- COVoc and COVTriage: novel resources to support literature triage.Bioinformatics (Oxford, England) · 2023Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
14 authors.
Yongqun HeUniversity of Michigan Medical School, Ann Arbor, MI, 48109, USA. yongqunh@med.umich.edu.ORCID http://orcid.org/0000-0001-9189-9661
Hong YuPeople's Hospital of Guizhou Province, Guiyang, Guizhou, 550002, China.
Edison OngUniversity of Michigan Medical School, Ann Arbor, MI, 48109, USA.
Yang WangUniversity of Michigan Medical School, Ann Arbor, MI, 48109, USA.
Yingtong LiuUniversity of Michigan Medical School, Ann Arbor, MI, 48109, USA.
Anthony HuffmanUniversity of Michigan Medical School, Ann Arbor, MI, 48109, USA.
Hsin-Hui HuangUniversity of Michigan Medical School, Ann Arbor, MI, 48109, USA.
John BeverleyNorthwestern University, Evanston, IL, 60208, USA.ORCID http://orcid.org/0000-0002-1118-1738
Junguk HurUniversity of North Dakota School of Medicine and Health Sciences, Grand Forks, ND, 58203, USA.ORCID http://orcid.org/0000-0002-0736-2149
Xiaolin YangInstitute of Basic Medical Sciences, Chinese Academy of Medical Sciences (CAMS) & School of Basic Medicine, Peking Union Medical College (PUMC), Beijing, China.
Luonan ChenKey Laboratory of Systems Biology, Center for Excellence in Molecular Cell Science, Shanghai Institute of Biochemistry and Cell Biology, Chinese Academy of Sciences, Shanghai, 200031, China.
Gilbert S OmennUniversity of Michigan Medical School, Ann Arbor, MI, 48109, USA.
Brian AtheyUniversity of Michigan Medical School, Ann Arbor, MI, 48109, USA.
Barry SmithUniversity at Buffalo, Buffalo, NY, 14260, USA.
Funding
University of Buffalo Clinical and Translational Science Institute - Supplement SchulyerUL1TR001412 · NCATS · STATE UNIVERSITY OF NEW YORK AT BUFFALO · PI MURPHY, TIMOTHY F · 2015 to 2024
$33.8MStrategic Vision & Impact on Environmental HealthP30ES017885 · NIEHS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI Dana Dolinoy · 2011 to 2026
$21.3MPRO: A Protein Ontology in Open Biomedical OntologiesR01GM080646 · NIGMS · UNIVERSITY OF DELAWARE · PI WU, CATHY H. · 2007 to 2018
$8.9MNational Library of Medicine Conference 2022T15LM012495 · NLM · STATE UNIVERSITY OF NEW YORK AT BUFFALO · PI PETER L. ELKIN · 2017 to 2026
$4.3MUniversity of Michigan Proteogenomics Data Analysis CenterU24CA210967 · NCI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI CHINNAIYAN, ARUL M, DHANASEKARAN, SARAVANA M · 2016 to 2020
$4.1MPathology Image Informatics Platform for visualization, analysis and managementU24CA199374 · NCI · CASE WESTERN RESERVE UNIVERSITY · PI GURCAN, METIN NAFI, MADABHUSHI, ANANT · 2015 to 2019
$2.9MOntology-supported Integrative Analysis and Visualization of Vaccine-induced Pathways and NetworksUH2AI132931 · NIAID · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI HE, YONGQUN, WU, GUANMING · 2019 to 2020
$437kChinese Academy of Medical Sciences (CAMS) 2019PT320003NCATS NIH HHS UL1 TR001412NCI NIH HHS U24 CA199374NCI NIH HHS U24 CA210967NIAID NIH HHS UH2 AI132931NIEHS NIH HHS P30 ES017885NIGMS NIH HHS R01 GM080646NLM NIH HHS T15 LM012495U-M | Medical School, University of Michigan (U-M Medical School) Global Reach AwardU.S. Department of Health & Human Services | National Institutes of Health (NIH) 1T15LM012495U.S. Department of Health & Human Services | National Institutes of Health (NIH) 1U24CA199374U.S. Department of Health & Human Services | National Institutes of Health (NIH) 1UL1TR001412U.S. Department of Health & Human Services | National Institutes of Health (NIH) P30ES017885U.S. Department of Health & Human Services | National Institutes of Health (NIH) R01GM080646U.S. Department of Health & Human Services | National Institutes of Health (NIH) U24CA210967
Abstract
PubMed holds no abstract for this paper.
Indexed as
Biological OntologiesCoronavirus InfectionsData AnalysisInformation DisseminationBetacoronavirusCOVID-19HumansKnowledgePandemicsPneumonia, ViralSARS-CoV-2
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.