Evidence map›Paper›PMID 32531190›Full record

ArticleStem cell reports2020

Rapid Crypt Cell Remodeling Regenerates the Intestinal Stem Cell Niche after Notch Inhibition.

Natacha Bohin, Theresa M Keeley, Alexis J Carulli, Emily M Walker, Elizabeth A Carlson, Jie Gao, Iannis Aifantis, Christian W Siebel, Michael W Rajala, Martin G Myers and 4 more

Open access · goldAbstract read
In one paragraph

Article in Stem cell reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
1.5field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 32 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Nuclei sense complex tissue shape and direct intestinal stem cell fate.bioRxiv : the preprint server for biology · 2025
    Article
  5. Article
  6. Review
  7. Review
  8. Article
  9. Article
  10. Review
  11. From waste to wealth: Repurposing slaughterhouse waste for xenotransplantation.Frontiers in bioengineering and biotechnology · 2023
    Article
  12. Intestinal Epithelial Regeneration in Response to Ionizing Irradiation.Journal of visualized experiments : JoVE · 2022
    Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. Review
  18. Review
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 3 institutions in 1 country.

Natacha BohinDepartment of Molecular & Integrative Physiology, University of Michigan, Ann Arbor, MI 48109, USA; Program in Cellular and Molecular Biology, University of Michigan, Ann Arbor, MI 48109, USA.
Theresa M KeeleyDepartment of Molecular & Integrative Physiology, University of Michigan, Ann Arbor, MI 48109, USA.
Alexis J CarulliDepartment of Molecular & Integrative Physiology, University of Michigan, Ann Arbor, MI 48109, USA.
Emily M WalkerDepartment of Molecular & Integrative Physiology, University of Michigan, Ann Arbor, MI 48109, USA.
Elizabeth A CarlsonDepartment of Molecular & Integrative Physiology, University of Michigan, Ann Arbor, MI 48109, USA.
Jie GaoDepartment of Pathology, New York University School of Medicine, New York, NY 10016, USA.
Iannis AifantisDepartment of Pathology, New York University School of Medicine, New York, NY 10016, USA.
Christian W SiebelDepartment of Discovery Oncology, Genentech, Inc, South San Francisco, CA 94080, USA.
Michael W RajalaDepartment of Internal Medicine, University of Michigan, Ann Arbor, MI 48109, USA.
Martin G MyersDepartment of Molecular & Integrative Physiology, University of Michigan, Ann Arbor, MI 48109, USA; Program in Cellular and Molecular Biology, University of Michigan, Ann Arbor, MI 48109, USA; Department of Internal Medicine, University of Michigan, Ann Arbor, MI 48109, USA.
Jennifer C JonesDepartment of Pediatrics, University of Colorado Medical School, Aurora, CO 80045, USA.
Constance D BrindleyDepartment of Pediatrics, University of Colorado Medical School, Aurora, CO 80045, USA.
Peter J DempseyDepartment of Pediatrics, University of Colorado Medical School, Aurora, CO 80045, USA.
Linda C SamuelsonDepartment of Molecular & Integrative Physiology, University of Michigan, Ann Arbor, MI 48109, USA; Program in Cellular and Molecular Biology, University of Michigan, Ann Arbor, MI 48109, USA; Department of Internal Medicine, University of Michigan, Ann Arbor, MI 48109, USA. Electronic address: lcsam@umich.edu.
University of Michigan–Ann Arbor · USUniversity of Colorado Denver · USNew York University · US

Funding

MICHIGAN MEDICAL SCIENTIST TRAINING PROGRAMT32GM007863 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI COLLINS, KATHLEEN L. · 1985 to 2024
$38.3M
University of Michigan Center for Gastrointestinal ResearchP30DK034933 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI OWYANG, CHUNG · 1986 to 2021
$22.5M
Pilot and Feasibility (P and F) ProgramP30DK089503 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI Joyce Lee · 2010 to 2026
$20.3M
Mechanisms of Intestinal Stem Cell Injury and RepairR01DK118023 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI SAMUELSON, LINDA C. · 2018 to 2021
$1.7M
Notch Signaling Regulates Generation of Progenitors from Intestinal Stem CellsF30DK095517 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI CARULLI, ALEXIS · 2012 to 2014
$76k
NIDDK NIH HHS F30 DK095517NIDDK NIH HHS P30 DK034933NIDDK NIH HHS P30 DK089503NIDDK NIH HHS R01 DK118023NIGMS NIH HHS T32 GM007863
6 · The paper itself

Abstract

Intestinal crypts have great capacity for repair and regeneration after intestinal stem cell (ISC) injury. Here, we define the cellular remodeling process resulting from ISC niche interruption by transient Notch pathway inhibition in adult mice. Although ISCs were retained, lineage tracing demonstrated a marked reduction in ISC function after Notch disruption. Surprisingly, Notch ligand-expressing Paneth cells were rapidly lost by apoptotic cell death. The ISC-Paneth cell changes were followed by a regenerative response, characterized by expansion of cells expressing Notch ligands Dll1 and Dll4, enhanced Notch signaling, and a proliferative surge. Lineage tracing and organoid studies showed that Dll1-expressing cells were activated to function as multipotential progenitors, generating both absorptive and secretory cells and replenishing the vacant Paneth cell pool. Our analysis uncovered a dynamic, multicellular remodeling response to acute Notch inhibition to repair the niche and restore homeostasis. Notably, this crypt regenerative response did not require ISC loss.

Indexed as

RegenerationStem Cell NicheAnimalsApoptosisCalcium-Binding ProteinsCell ProliferationIntestinesIntracellular Signaling Peptides and ProteinsMembrane ProteinsMice, TransgenicModels, BiologicalReceptors, NotchStem CellsCalcium-Binding Proteinsdelta proteinDlk1 protein, mouseIntracellular Signaling Peptides and ProteinsMembrane ProteinsReceptors, NotchCBC stem cellcellular plasticity/ DLL1/ Paneth cell/ regeneration/ secretory progenitor cellDLL4facultative stem cell

Identifiers

PMID32531190
PMCPMC7363878
OpenAlexW3034229995

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.