Evidence map›Paper›PMID 32529355›Full record

ArticleExperimental & applied acarology2020

Molecular characterization of Cardinium, Rickettsia, Spiroplasma and Wolbachia in mite species from citrus orchards.

Tatiana Pina, Beatriz Sabater-Muñoz, Marc Cabedo-López, Joaquín Cruz-Miralles, Josep A Jaques, Mónica A Hurtado-Ruiz

Open access · greenAbstract read
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In one paragraph

Article in Experimental & applied acarology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.1field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Tatiana PinaDepartament de Ciències Agràries i del Medi Natural, Universitat Jaume I (UJI), Campus del Riu Sec, 12071, Castellón de la Plana, Spain.ORCID http://orcid.org/0000-0002-3074-4751
Beatriz Sabater-MuñozSmurfit Institute of Genetics, Trinity College Dublin, University of Dublin, College Green, Dublin 2, Ireland.ORCID http://orcid.org/0000-0002-0301-215X
Marc Cabedo-LópezDepartament de Ciències Agràries i del Medi Natural, Universitat Jaume I (UJI), Campus del Riu Sec, 12071, Castellón de la Plana, Spain.
Joaquín Cruz-MirallesDepartament de Ciències Agràries i del Medi Natural, Universitat Jaume I (UJI), Campus del Riu Sec, 12071, Castellón de la Plana, Spain.
Josep A JaquesDepartament de Ciències Agràries i del Medi Natural, Universitat Jaume I (UJI), Campus del Riu Sec, 12071, Castellón de la Plana, Spain.ORCID http://orcid.org/0000-0003-1353-1727
Mónica A Hurtado-RuizDepartament de Ciències Agràries i del Medi Natural, Universitat Jaume I (UJI), Campus del Riu Sec, 12071, Castellón de la Plana, Spain. mhurtado@uji.es.ORCID http://orcid.org/0000-0003-2678-941X
Universitat Jaume I · ESTrinity College Dublin · IE

Funding

Ministerio de Economía y Competitividad AGL2014-55616-C3-3-RMinisterio de Economía y Competitividad FPI BES-2015-074570Universitat Jaume I PICDUniversitat Jaume I UJI-B2017-24
6 · The paper itself

Abstract

Tetranychidae spider mites are considered key citrus pests in some production areas, especially Tetranychus urticae Koch. Over the past decades, pesticide overuse seems to have promoted T. urticae population selection in citrus orchards. However, the microbiota has also been pointed out as a plausible explanation for population structure or plant host specialisation observed in several arthropod species. In this work, we have determined the incidence of Cardinium, Rickettsia, Spiroplasma and Wolbachia as representatives of major distorter bacteria genera in Aplonobia histricina (Berlese), Eutetranychus banksi (McGregor), Eutetranychus orientalis (Klein), Panonychus citri (McGregor), Tetranychus evansi Baker and Pritchard, Tetranychus turkestani Ugarov and Nikolskii, and T. urticae populations from Spanish citrus orchards. Only Wolbachia was detected by PCR. The multilocus alignment approach and phylogenetic inference indicated that all detected Wolbachia belong to supergroup B. The deep analysis of each 16S rDNA, ftsZ and wsp gene sequences allowed identifying several phylogenetically different Wolbachia sequences. It probably indicates the presence of several different races or strains, all of them belonging to supergroup B. The wsp sequence typing analysis unveiled the presence of the two already identified alleles (61 and 370) and allowed to contribute with five new alleles, supporting the presence of different but related B-races in the studied mite populations. The results are discussed and related to T. urticae population structure, previously observed in Spanish citrus orchards.

Indexed as

CitrusMitesRickettsiaSpiroplasmaTetranychidaeWolbachiaAnimalsPhylogeny16S rDNAMultilocus alignment approachPhylogenySupergroup BTetranychidaeWolbachia

Identifiers

PMID32529355
OpenAlexW3035666511

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.