Evidence map›Paper›PMID 32529193›Full record

ArticleCell reports. Medicine2020

Proteogenomic Characterization of Ovarian HGSC Implicates Mitotic Kinases, Replication Stress in Observed Chromosomal Instability.

Jason E McDermott, Osama A Arshad, Vladislav A Petyuk, Yi Fu, Marina A Gritsenko, Therese R Clauss, Ronald J Moore, Athena A Schepmoes, Rui Zhao, Matthew E Monroe and 23 more

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Cell reports. Medicine, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 73 papers.

0numbers the graph read from it
0cells of the map it votes in
73citing papers in PubMed
9.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

73 citing papers in PubMed, 95 citations in OpenAlex.

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  16. Matrix Metalloproteinases as Candidate Antigenic Determinants for Anti-Tumor Autoantibodies in Human Ovarian Cancer: A Post Hoc Analysis.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2025
    Article
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13 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

33 authors at 8 institutions in 1 country.

Jason E McDermottBiological Sciences Division, Pacific Northwest National Laboratory, Richland, WA 99354, USA.
Osama A ArshadBiological Sciences Division, Pacific Northwest National Laboratory, Richland, WA 99354, USA.
Vladislav A PetyukBiological Sciences Division, Pacific Northwest National Laboratory, Richland, WA 99354, USA.
Yi FuDepartment of Pathology, Johns Hopkins Medical Institutions, Baltimore, MD 21205, USA.
Marina A GritsenkoBiological Sciences Division, Pacific Northwest National Laboratory, Richland, WA 99354, USA.
Therese R ClaussBiological Sciences Division, Pacific Northwest National Laboratory, Richland, WA 99354, USA.
Ronald J MooreBiological Sciences Division, Pacific Northwest National Laboratory, Richland, WA 99354, USA.
Athena A SchepmoesBiological Sciences Division, Pacific Northwest National Laboratory, Richland, WA 99354, USA.
Rui ZhaoBiological Sciences Division, Pacific Northwest National Laboratory, Richland, WA 99354, USA.
Matthew E MonroeBiological Sciences Division, Pacific Northwest National Laboratory, Richland, WA 99354, USA.
Michael SchnaubeltDepartment of Pathology, Johns Hopkins Medical Institutions, Baltimore, MD 21205, USA.
Chia-Feng TsaiBiological Sciences Division, Pacific Northwest National Laboratory, Richland, WA 99354, USA.
Samuel H PayneDepartment of Biology, Brigham Young University, Provo, UT 84602, USA.
Chen HuangLester and Sue Smith Breast Center, Baylor College of Medicine, Houston, TX 77030, USA.
Liang-Bo WangThe McDonnell Genome Institute, Washington University in St. Louis, St Louis, MO 63108, USA.
Steven FoltzThe McDonnell Genome Institute, Washington University in St. Louis, St Louis, MO 63108, USA.
Matthew WyczalkowskiThe McDonnell Genome Institute, Washington University in St. Louis, St Louis, MO 63108, USA.
Yige WuThe McDonnell Genome Institute, Washington University in St. Louis, St Louis, MO 63108, USA.
Ehwang SongBiological Sciences Division, Pacific Northwest National Laboratory, Richland, WA 99354, USA.
Molly A BrewerDepartment of Obstetrics and Gynecology, University of Connecticut, Farmington, CT 06030, USA.
Mathangi ThiagarajanLeidos Biomedical Research, Frederick National Laboratory for Cancer Research, Frederick, MD 21702, USA.
Christopher R KinsingerOffice of Cancer Clinical Proteomics Research, National Cancer Institute, Bethesda, MD 20892, USA.
Ana I RoblesOffice of Cancer Clinical Proteomics Research, National Cancer Institute, Bethesda, MD 20892, USA.
Emily S BojaOffice of Cancer Clinical Proteomics Research, National Cancer Institute, Bethesda, MD 20892, USA.
Henry RodriguezOffice of Cancer Clinical Proteomics Research, National Cancer Institute, Bethesda, MD 20892, USA.
Daniel W ChanDepartment of Pathology, Johns Hopkins Medical Institutions, Baltimore, MD 21205, USA.
Bing ZhangLester and Sue Smith Breast Center, Baylor College of Medicine, Houston, TX 77030, USA.
Zhen ZhangDepartment of Pathology, Johns Hopkins Medical Institutions, Baltimore, MD 21205, USA.
Li DingThe McDonnell Genome Institute, Washington University in St. Louis, St Louis, MO 63108, USA.
Richard D SmithBiological Sciences Division, Pacific Northwest National Laboratory, Richland, WA 99354, USA.
Tao LiuBiological Sciences Division, Pacific Northwest National Laboratory, Richland, WA 99354, USA.
Karin D RodlandBiological Sciences Division, Pacific Northwest National Laboratory, Richland, WA 99354, USA.
Clinical Proteomic Tumor Analysis Consortium
Pacific Northwest National Laboratory · USJames S. McDonnell Foundation · USJohns Hopkins University · USNational Cancer Institute · USBaylor College of Medicine · USBrigham Young University · USLeidos (United States) · USUniversity of Connecticut · US

Funding

Equipment Supplement Request for a Research Resource for Ultra-sensitive High Throughput ProteomicsP41GM103493 · NIGMS · BATTELLE PACIFIC NORTHWEST LABORATORIES · PI SMITH, RICHARD D · 2012 to 2022
$22.6M
PNNL Clinical Proteome Characterization CenterU24CA160019 · NCI · BATTELLE PACIFIC NORTHWEST LABORATORIES · PI RODLAND, KARIN D, SMITH, RICHARD D · 2011 to 2016
$15.7M
Proteome Characterization Center: A Genoproteomics Pipeline for Cance ResearchU24CA160036 · NCI · JOHNS HOPKINS UNIVERSITY · PI CHAN, DANIEL WANYUI, ZHANG, HUI · 2011 to 2016
$10.7M
PNNL Proteome Characterization CenterU24CA210955 · NCI · BATTELLE PACIFIC NORTHWEST LABORATORIES · PI LIU, TAO, SMITH, RICHARD D · 2016 to 2020
$5.3M
NCI NIH HHS U24 CA160019NCI NIH HHS U24 CA160036NCI NIH HHS U24 CA210955NIGMS NIH HHS P41 GM103493
6 · The paper itself

Abstract

In the absence of a dominant driving mutation other than uniformly present TP53 mutations, deeper understanding of the biology driving ovarian high-grade serous cancer (HGSC) requires analysis at a functional level, including post-translational modifications. Comprehensive proteogenomic and phosphoproteomic characterization of 83 prospectively collected ovarian HGSC and appropriate normal precursor tissue samples (fallopian tube) under strict control of ischemia time reveals pathways that significantly differentiate between HGSC and relevant normal tissues in the context of homologous repair deficiency (HRD) status. In addition to confirming key features of HGSC from previous studies, including a potential survival-associated signature and histone acetylation as a marker of HRD, deep phosphoproteomics provides insights regarding the potential role of proliferation-induced replication stress in promoting the characteristic chromosomal instability of HGSC and suggests potential therapeutic targets for use in precision medicine trials.

Indexed as

Cystadenocarcinoma, SerousOvarian NeoplasmsAdultAgedAged, 80 and overCell Cycle CheckpointsChromosomal InstabilityCohort StudiesDNA DamageDNA ReplicationFallopian Tube NeoplasmsFemaleGene Expression Regulation, NeoplasticHumansMiddle AgedMitosisPhosphotransferasesTumor Suppressor Protein p53

Identifiers

PMID32529193
PMCPMC7289043
OpenAlexW3015375987

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.