Evidence map›Paper›PMID 32528131›Full record

ArticleOncogene2020

Ribosomal protein S11 influences glioma response to TOP2 poisons.

Chidiebere U Awah, Li Chen, Mukesh Bansal, Aayushi Mahajan, Jan Winter, Meeki Lad, Louisa Warnke, Edgar Gonzalez-Buendia, Cheol Park, Daniel Zhang and 13 more

Open access · bronzeAbstract read
In one paragraph

Article in Oncogene, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 33 citations in OpenAlex.

  1. Article
  2. Unlocking Glioblastoma Vulnerabilities with CRISPR-Based Genetic Screening.International journal of molecular sciences · 2024
    Review
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Review
  9. Review
  10. Article
  11. Review
  12. Article
  13. Review
  14. Ribosome Biogenesis and Cancer: Overview on Ribosomal Proteins.International journal of molecular sciences · 2021
    Review
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

23 authors at 7 institutions in 3 countries.

Chidiebere U AwahDepartment of Neurological Surgery, Feinberg School of Medicine, Northwestern University , Chicago, IL, United States.
Li ChenDepartment of Neurological Surgery, Feinberg School of Medicine, Northwestern University , Chicago, IL, United States.
Mukesh BansalPsychogenic Inc., Paramus, NJ, USA.
Aayushi MahajanDepartment of Neurological Surgery, Columbia University Medical Center, Columbia University, New York City, NY, USA.
Jan WinterFunctional Genomics and Signaling, German Center for Cancer Research, Heidelberg, Germany.
Meeki LadMailman School of Public Health, Columbia University, New York City, NY, USA.
Louisa WarnkeDepartment of Neurological Surgery, Feinberg School of Medicine, Northwestern University , Chicago, IL, United States.
Edgar Gonzalez-BuendiaDepartment of Neurological Surgery, Feinberg School of Medicine, Northwestern University , Chicago, IL, United States.
Cheol ParkDepartment of Neurological Surgery, Feinberg School of Medicine, Northwestern University , Chicago, IL, United States.
Daniel ZhangDepartment of Neurological Surgery, Feinberg School of Medicine, Northwestern University , Chicago, IL, United States.ORCID http://orcid.org/0000-0001-9962-9295
Eric FeldsteinDepartment of Neurological Surgery, Feinberg School of Medicine, Northwestern University , Chicago, IL, United States.
Dou YuDepartment of Neurological Surgery, Feinberg School of Medicine, Northwestern University , Chicago, IL, United States.
Markella ZannikouDepartment of Neurological Surgery, Feinberg School of Medicine, Northwestern University , Chicago, IL, United States.
Irina V BalyasnikovaDepartment of Neurological Surgery, Feinberg School of Medicine, Northwestern University , Chicago, IL, United States.
Regina MartuscelloDepartment of Pathology, Columbia University Medical Centre, Columbia University, New York City, NY, USA.
Silvana KonermanMolecular and Cell Biology, Salk Institute, La Jolla, CA, USA.
Balázs GyőrffyMTA TTK Lendület Cancer Biomarker Research Group, Institute of Enzymology, Hungarian Academy of Sciences, Budapest, Hungary.
Kirsten B BurdettDepartment of Preventive Medicine, Northwestern University, Chicago, IL, USA.
Denise M ScholtensDepartment of Preventive Medicine, Northwestern University, Chicago, IL, USA.
Roger StuppDepartment of Neurological Surgery, Feinberg School of Medicine, Northwestern University , Chicago, IL, United States.ORCID http://orcid.org/0000-0002-5483-3118
Atique AhmedDepartment of Neurological Surgery, Feinberg School of Medicine, Northwestern University , Chicago, IL, United States.
Patrick HsuMolecular and Cell Biology, Salk Institute, La Jolla, CA, USA.
Adam M SonabendDepartment of Neurological Surgery, Feinberg School of Medicine, Northwestern University , Chicago, IL, United States. adam.sonabend@nm.org.ORCID http://orcid.org/0000-0002-8347-1945
Northwestern University · USColumbia University Irving Medical Center · USSalk Institute for Biological Studies · USColumbia University · USGerman Cancer Research Center · DEPsychogenics (United States) · USSemmelweis University · HU

Funding

Tumor Environment and Metastasis (TEAM) Research ProgramP30CA060553 · NCI · NORTHWESTERN UNIVERSITY AT CHICAGO · PI LEONIDAS C. PLATANIAS · 1993 to 2026
$153.9M
Viral Vector Core (VVC)P30CA014195 · NCI · SALK INSTITUTE FOR BIOLOGICAL STUDIES · PI Reuben Shaw · 1985 to 2026
$82.8M
STINGing GBM: A First-in- Man Clinical Trial in Surgical Resectable Recurrent GBMP50CA221747 · NCI · NORTHWESTERN UNIVERSITY AT CHICAGO · PI Atique U. Ahmed · 2018 to 2026
$21.4M
TOP2A effects on transcription in gliomas: implications for personalized therapyDP5OD021356 · OD · NORTHWESTERN UNIVERSITY AT CHICAGO · PI SONABEND, ADAM M · 2015 to 2019
$2.0M
NCI NIH HHS P30 CA014195NCI NIH HHS P30 CA060553NCI NIH HHS P50 CA221747NIH HHS DP5 OD021356
6 · The paper itself

Abstract

Topoisomerase II poisons are one of the most common class of chemotherapeutics used in cancer. We and others had shown that a subset of glioblastomas, the most malignant of all primary brain tumors in adults, is responsive to TOP2 poisons. To identify genes that confer susceptibility to this drug in gliomas, we performed a genome-scale CRISPR knockout screen with etoposide. Genes involved in protein synthesis and DNA damage were implicated in etoposide susceptibility. To define potential biomarkers for TOP2 poisons, CRISPR hits were overlapped with genes whose expression correlates with susceptibility to this drug across glioma cell lines, revealing ribosomal protein subunit RPS11, 16, and 18 as putative biomarkers for response to TOP2 poisons. Loss of RPS11 led to resistance to etoposide and doxorubicin and impaired the induction of proapoptotic gene APAF1 following treatment. The expression of these ribosomal subunits was also associated with susceptibility to TOP2 poisons across cell lines from gliomas and multiple other cancers.

Indexed as

Apoptotic Protease-Activating Factor 1Brain NeoplasmsCell Line, TumorCRISPR-Cas SystemsDNA Breaks, Double-StrandedDNA RepairDNA Topoisomerases, Type IIDoxorubicinEtoposideGene Knockout TechniquesGlioblastomaHumansRibosomal ProteinsTopoisomerase II InhibitorsAPAF1 protein, humanApoptotic Protease-Activating Factor 1DNA Topoisomerases, Type IIDoxorubicinEtoposideRibosomal ProteinsRPS11 protein, humanTopoisomerase II Inhibitors

Identifiers

PMID32528131
PMCPMC7646677
OpenAlexW3034616810

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.