Evidence map›Paper›PMID 32528005›Full record

ArticleNature communications2020

Identification of interferon-stimulated genes that attenuate Ebola virus infection.

Makoto Kuroda, Peter J Halfmann, Lindsay Hill-Batorski, Makoto Ozawa, Tiago J S Lopes, Gabriele Neumann, John W Schoggins, Charles M Rice, Yoshihiro Kawaoka

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
1.0field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 54 citations in OpenAlex.

  1. Article
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  5. Generation of Biologically Contained Marburg Virus.Methods in molecular biology (Clifton, N.J.) · 2025
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  8. The Immune Response ofInternational journal of molecular sciences · 2024
    Article
  9. Article
  10. Article
  11. Article
  12. An Antiviral Role for TRIM14 in Ebola Virus Infection.The Journal of infectious diseases · 2023
    Article
  13. Article
  14. Review
  15. Control ofFrontiers in immunology · 2023
    Article
  16. Article
  17. Analysis of the Differential Expression and Antiviral Activity of Porcine Interferon-α In Vitro.International journal of peptide research and therapeutics · 2023
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 2 countries.

Makoto KurodaDepartment of Pathobiological Sciences, School of Veterinary Medicine, Influenza Research Institute, University of Wisconsin-Madison, Madison, WI, 53711, USA.
Peter J HalfmannDepartment of Pathobiological Sciences, School of Veterinary Medicine, Influenza Research Institute, University of Wisconsin-Madison, Madison, WI, 53711, USA. peter.halfmann@wisc.edu.ORCID http://orcid.org/0000-0002-1648-1625
Lindsay Hill-BatorskiDepartment of Pathobiological Sciences, School of Veterinary Medicine, Influenza Research Institute, University of Wisconsin-Madison, Madison, WI, 53711, USA.
Makoto OzawaLaboratory of Animal Hygiene, Joint Faculty of Veterinary Medicine, Kagoshima University, Kagoshima, 890-0065, Japan.ORCID http://orcid.org/0000-0002-7731-5321
Tiago J S LopesDepartment of Pathobiological Sciences, School of Veterinary Medicine, Influenza Research Institute, University of Wisconsin-Madison, Madison, WI, 53711, USA.
Gabriele NeumannDepartment of Pathobiological Sciences, School of Veterinary Medicine, Influenza Research Institute, University of Wisconsin-Madison, Madison, WI, 53711, USA.
John W SchogginsDepartment of Microbiology, UT Southwestern Medical Center, Dallas, TX, 75390, USA.ORCID http://orcid.org/0000-0002-7944-6800
Charles M RiceLaboratory of Virology and Infectious Disease, Center for the Study of Hepatitis C, The Rockefeller University, New York, NY, 10065, USA.
Yoshihiro KawaokaDepartment of Pathobiological Sciences, School of Veterinary Medicine, Influenza Research Institute, University of Wisconsin-Madison, Madison, WI, 53711, USA. yoshihiro.kawaoka@wisc.edu.ORCID http://orcid.org/0000-0001-5061-8296
University of Wisconsin–Madison · USKagoshima University · JPRockefeller University · USSouthwestern Medical Center

Funding

The Burden of Chikungunya and Dengue Infection in KenyaU54AI081680 · NIAID · OREGON HEALTH & SCIENCE UNIVERSITY · PI RYMAN, KATHERINE D · 2009 to 2013
$40.4M
Systems Biology Identifies Restriction Factors for West Nile VirusU19AI106772 · NIAID · UNIVERSITY OF WISCONSIN-MADISON · PI KAWAOKA, YOSHIHIRO · 2013 to 2017
$26.1M
Type I interferon-stimulated genes and the antiviral immune responseR01AI091707 · NIAID · ROCKEFELLER UNIVERSITY · PI RICE, CHARLES M · 2011 to 2020
$5.5M
The role of interferon-stimulated genes in antiviral immunityF32DK082155 · NIDDK · ROCKEFELLER UNIVERSITY · PI SCHOGGINS, JOHN W. · 2008 to 2010
$142k
NIAID NIH HHS R01 AI091707NIAID NIH HHS U19 AI106772NIAID NIH HHS U54 AI081680NIDDK NIH HHS F32 DK082155
6 · The paper itself

Abstract

The West Africa Ebola outbreak was the largest outbreak ever recorded, with over 28,000 reported infections; this devastating epidemic emphasized the need to understand the mechanisms to counteract virus infection. Here, we screen a library of nearly 400 interferon-stimulated genes (ISGs) against a biologically contained Ebola virus and identify several ISGs not previously known to affect Ebola virus infection. Overexpression of the top ten ISGs attenuates virus titers by up to 1000-fold. Mechanistic studies demonstrate that three ISGs interfere with virus entry, six affect viral transcription/replication, and two inhibit virion formation and budding. A comprehensive study of one ISG (CCDC92) that shows anti-Ebola activity in our screen reveals that CCDC92 can inhibit viral transcription and the formation of complete virions via an interaction with the viral protein NP. Our findings provide insights into Ebola virus infection that could be exploited for the development of therapeutics against this virus.

Indexed as

AnimalsBlotting, WesternCarrier ProteinsCell SurvivalChlorocebus aethiopsCytoskeletal ProteinsEbolavirusFluorescent Antibody TechniqueGene ExpressionHEK293 CellsHeLa CellsHumansImmunoprecipitationInterferonsProtein BindingReverse Transcriptase Polymerase Chain ReactionCarrier ProteinsCCDC92 protein, humanCytoskeletal ProteinsInterferonsViral Proteins

Identifiers

PMID32528005
PMCPMC7289892
OpenAlexW3034842070

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.