Evidence map›Paper›PMID 32526769›Full record

ArticlePloS one2020

Genetic analysis of agronomic traits in elite sugarcane (Saccharum spp.) germplasm.

Fenggang Zan, Yuebin Zhang, Zhuandi Wu, Jun Zhao, Caiwen Wu, Yong Zhao, Xuekuan Chen, Liping Zhao, Wei Qin, Li Yao and 5 more

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in PloS one, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
3.2field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 17 citations in OpenAlex.

  1. Review
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

15 authors at 2 institutions in 2 countries.

Fenggang ZanYunnan Province Key Laboratory of Sugarcane Genetic Improvement/ Sugarcane Research Institute, Yunnan Academy of Agricultural Sciences, Kaiyuan, Yunnan Province, China.ORCID 0000-0002-4929-9803
Yuebin ZhangYunnan Province Key Laboratory of Sugarcane Genetic Improvement/ Sugarcane Research Institute, Yunnan Academy of Agricultural Sciences, Kaiyuan, Yunnan Province, China.
Zhuandi WuYunnan Province Key Laboratory of Sugarcane Genetic Improvement/ Sugarcane Research Institute, Yunnan Academy of Agricultural Sciences, Kaiyuan, Yunnan Province, China.
Jun ZhaoYunnan Province Key Laboratory of Sugarcane Genetic Improvement/ Sugarcane Research Institute, Yunnan Academy of Agricultural Sciences, Kaiyuan, Yunnan Province, China.
Caiwen WuYunnan Province Key Laboratory of Sugarcane Genetic Improvement/ Sugarcane Research Institute, Yunnan Academy of Agricultural Sciences, Kaiyuan, Yunnan Province, China.
Yong ZhaoYunnan Province Key Laboratory of Sugarcane Genetic Improvement/ Sugarcane Research Institute, Yunnan Academy of Agricultural Sciences, Kaiyuan, Yunnan Province, China.
Xuekuan ChenYunnan Province Key Laboratory of Sugarcane Genetic Improvement/ Sugarcane Research Institute, Yunnan Academy of Agricultural Sciences, Kaiyuan, Yunnan Province, China.
Liping ZhaoYunnan Province Key Laboratory of Sugarcane Genetic Improvement/ Sugarcane Research Institute, Yunnan Academy of Agricultural Sciences, Kaiyuan, Yunnan Province, China.
Wei QinYunnan Province Key Laboratory of Sugarcane Genetic Improvement/ Sugarcane Research Institute, Yunnan Academy of Agricultural Sciences, Kaiyuan, Yunnan Province, China.
Li YaoYunnan Province Key Laboratory of Sugarcane Genetic Improvement/ Sugarcane Research Institute, Yunnan Academy of Agricultural Sciences, Kaiyuan, Yunnan Province, China.
Hongming XiaYunnan Province Key Laboratory of Sugarcane Genetic Improvement/ Sugarcane Research Institute, Yunnan Academy of Agricultural Sciences, Kaiyuan, Yunnan Province, China.
Peifang ZhaoYunnan Province Key Laboratory of Sugarcane Genetic Improvement/ Sugarcane Research Institute, Yunnan Academy of Agricultural Sciences, Kaiyuan, Yunnan Province, China.
Kun YangYunnan Province Key Laboratory of Sugarcane Genetic Improvement/ Sugarcane Research Institute, Yunnan Academy of Agricultural Sciences, Kaiyuan, Yunnan Province, China.
Jiayong LiuYunnan Province Key Laboratory of Sugarcane Genetic Improvement/ Sugarcane Research Institute, Yunnan Academy of Agricultural Sciences, Kaiyuan, Yunnan Province, China.
Xiping YangGuangxi Key Lab of Sugarcane Biology, Guangxi University, Nanning, Guangxi, China.
Yunnan Academy of Agricultural Sciences · CNGuangxi University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Sugarcane (Saccharum spp.) is an important economic crop, supplying up to 80% of the table sugar and ~60% of bio-ethanol worldwide. Due to population growth and dwindling fossil-fuel reserves, the demand for sugar and bio-ethanol requires significant improvement in sugarcane production. Breeding sugarcane cultivars with high-performance agronomic traits is undoubtedly the most efficient way to achieve this goal. Therefore, evaluating agronomic traits and dissecting underlying loci are critically important for this aim steps in providing genetic resources and molecular markers for selection. In this study, we assembled a diversity panel of 236 elite sugarcane germplasms originally collected from 12 countries. We evaluated 28 agronomic traits in the diversity panel with three replicates. The diversity panel was genotyped using amplified fragment length polymorphism markers, and a total of 1,359 markers were generated. Through the genome-wide association study, we identified three markers significantly associated with three traits evaluated at a stringent threshold (P < 0.05 after Bonferroni correction). The genotypes of the three associated markers grouped respective trait values into two distinct groups, supporting the reliability of these markers for breeding selection. Our study provides putative molecular markers linked to agronomic traits for breeding robust sugarcane cultivars. Additionally, this study emphasized the importance of sugarcane germplasm introduced from other countries and suggested that the use of these germplasms in breeding programs depends on local industrial needs.

Indexed as

Polymorphism, GeneticCrops, AgriculturalGenome-Wide Association StudyPlant BreedingQuantitative Trait, HeritableQuantitative Trait LociSaccharumSeeds

Identifiers

PMID32526769
PMCPMC7289623
OpenAlexW3035190036

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.