Evidence map›Paper›PMID 32526449›Full record

ArticleMolecular metabolism2020

Differential regulation of the immune system in a brain-liver-fats organ network during short-term fasting.

Susie S Y Huang, Melanie Makhlouf, Eman H AbouMoussa, Mayra L Ruiz Tejada Segura, Lisa S Mathew, Kun Wang, Man C Leung, Damien Chaussabel, Darren W Logan, Antonio Scialdone and 2 more

Open access · goldAbstract read
In one paragraph

Article in Molecular metabolism, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.7field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 4 countries.

Susie S Y HuangSidra Medicine, PO Box 26999, Doha, Qatar. Electronic address: susie.sy.huang@gmail.com.
Melanie MakhloufSidra Medicine, PO Box 26999, Doha, Qatar. Electronic address: mmaklouf1@sidra.org.
Eman H AbouMoussaSidra Medicine, PO Box 26999, Doha, Qatar. Electronic address: eaboumoussa@sidra.org.
Mayra L Ruiz Tejada SeguraInstitute of Epigenetics and Stem Cells, Helmholtz Zentrum München, Marchioninistraße 25, 81377, München, Germany; Institute of Functional Epigenetics, Helmholtz Zentrum München, Ingolstädter Landstraße 1, 85764, Neuherberg, Germany; Institute of Computational Biology, Helmholtz Zentrum München, Ingolstädter Landstraße 1, 85764, Neuherberg, Germany. Electronic address: aryam950812@gmail.com.
Lisa S MathewSidra Medicine, PO Box 26999, Doha, Qatar. Electronic address: lmathew@sidra.org.
Kun WangSidra Medicine, PO Box 26999, Doha, Qatar. Electronic address: kwang@sidra.org.
Man C LeungSidra Medicine, PO Box 26999, Doha, Qatar. Electronic address: bmcleung@gmail.com.
Damien ChaussabelSidra Medicine, PO Box 26999, Doha, Qatar. Electronic address: dchaussabel@sidra.org.
Darren W LoganWellcome Sanger Institute, Wellcome Genome Campus, Hinxton, Cambridge, CB10 1SD, UK. Electronic address: darren.logan@effem.com.
Antonio ScialdoneInstitute of Epigenetics and Stem Cells, Helmholtz Zentrum München, Marchioninistraße 25, 81377, München, Germany; Institute of Functional Epigenetics, Helmholtz Zentrum München, Ingolstädter Landstraße 1, 85764, Neuherberg, Germany; Institute of Computational Biology, Helmholtz Zentrum München, Ingolstädter Landstraße 1, 85764, Neuherberg, Germany. Electronic address: antonio.scialdone@helmholtz-muenchen.de.
Mathieu GarandSidra Medicine, PO Box 26999, Doha, Qatar. Electronic address: mathieu.garand@gmail.com.
Luis R SaraivaSidra Medicine, PO Box 26999, Doha, Qatar; Monell Chemical Senses Center, 3500 Market Street, Philadelphia, PA, 19104, USA. Electronic address: saraivalmr@gmail.com.
Qatar Airways (Qatar) · QAHelmholtz Zentrum München · DEMonell Chemical Senses Center · USWellcome Sanger Institute · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectiveFasting regimens can promote health, mitigate chronic immunological disorders, and improve age-related pathophysiological parameters in animals and humans. Several ongoing clinical trials are using fasting as a potential therapy for various conditions. Fasting alters metabolism by acting as a reset for energy homeostasis, but the molecular mechanisms underlying the beneficial effects of short-term fasting (STF) are not well understood, particularly at the systems or multiorgan level.

methodsWe performed RNA-sequencing in nine organs from mice fed ad libitum (0 h) or subjected to fasting five times (2-22 h). We applied a combination of multivariate analysis, differential expression analysis, gene ontology, and network analysis for an in-depth understanding of the multiorgan transcriptome. We used literature mining solutions, LitLab™ and Gene Retriever™, to identify the biological and biochemical terms significantly associated with our experimental gene set, which provided additional support and meaning to the experimentally derived gene and inferred protein data.

resultsWe cataloged the transcriptional dynamics within and between organs during STF and discovered differential temporal effects of STF among organs. Using gene ontology enrichment analysis, we identified an organ network sharing 37 common biological pathways perturbed by STF. This network incorporates the brain, liver, interscapular brown adipose tissue, and posterior-subcutaneous white adipose tissue; hence, we named it the brain-liver-fats organ network. Using Reactome pathways analysis, we identified the immune system, dominated by T cell regulation processes, as a central and prominent target of systemic modulations during STF in this organ network. The changes we identified in specific immune components point to the priming of adaptive immunity and parallel the fine-tuning of innate immune signaling.

conclusionsOur study provides a comprehensive multiorgan transcriptomic profiling of mice subjected to multiple periods of STF and provides new insights into the molecular modulators involved in the systemic immunotranscriptomic changes that occur during short-term energy loss.

Indexed as

Adipose TissueAdipose Tissue, BrownAdipose Tissue, WhiteAnimalsBrainEnergy MetabolismFastingFatsFatty LiverGene ExpressionGene Expression ProfilingImmune SystemLiverMaleMiceMice, Inbred C57BLFatsFastingImmune systemMultiorganRNA-seqSystems biology

Identifiers

PMID32526449
PMCPMC7339127
OpenAlexW3034765257

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.