Effective biomedical document classification for identifying publications relevant to the mouse Gene Expression Database (GXD).

Xiangying Jiang, Martin Ringwald, Judith Blake, Haggit Shatkay

Abstract readPublished Erratum

In one paragraph

Article in Database : the journal of biological databases and curation, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it

0cells of the map it votes in

0citing papers in PubMed

–field-weighted citation impact

1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

Erratum for
Effective biomedical document classification for identifying publications relevant to the mouse Gene Expression Database (GXD).2017

5 · Who and what money

Authors and funding

4 authors.

Xiangying JiangDepartment of Computer and Information Sciences, University of Delaware, 101 Smith Hall, Newark, DE, USA.

Martin RingwaldDepartment of Computer and Information Sciences, The Jackson Laboratory, 600 Main Street, Bar Harbor, ME, USA.

Judith BlakeDepartment of Computer and Information Sciences, The Jackson Laboratory, 600 Main Street, Bar Harbor, ME, USA.

Haggit ShatkayDepartment of Computer and Information Sciences, University of Delaware, 101 Smith Hall, Newark, DE, USA.

Funding

Clinical Importance of Drug-Drug InteractionsR01AG025152 · NIA · UNIVERSITY OF PENNSYLVANIA · PI HENNESSY, SEAN, LI, LANG · 2006 to 2021

$8.1M

Uncovering Clinical Evidence in COVID-19 Publications: An Integrated Search via Text & ImagesR01LM012527 · NLM · UNIVERSITY OF DELAWARE · PI EIGENMANN, RUDOLF, MARAI, GEORGETA-ELISABETA · 2017 to 2020

$1.9M

Evidence-based Drug-Interaction Discovery: In-Vivo, In-Vitro and ClinicalR01LM011945 · NLM · INDIANA UNIVERSITY INDIANAPOLIS · PI LI, LANG, ROCHA, LUIS M · 2014 to 2017

$1.8M

NIA NIH HHS R01 AG025152NLM NIH HHS R01 LM011945NLM NIH HHS R01 LM012527

6 · The paper itself

Abstract

PubMed holds no abstract for this paper.

Identifiers

PMID32525206

DOI10.1093/database/baaa043

PMCPMC7287504

What OpenQuestion holds

Textmetadata

LicenceCC BY

Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.