Evidence map›Paper›PMID 32522879›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2020

Human XPG nuclease structure, assembly, and activities with insights for neurodegeneration and cancer from pathogenic mutations.

Susan E Tsutakawa, Altaf H Sarker, Clifford Ng, Andrew S Arvai, David S Shin, Brian Shih, Shuai Jiang, Aye C Thwin, Miaw-Sheue Tsai, Alexandra Willcox and 9 more

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed
3.0field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed, 66 citations in OpenAlex.

  1. Crystal Structure of Trabectedin-DNA Complex.Journal of molecular biology · 2026
    Article
  2. DNA polymerase I: structure, activity, and function in bacterial DNA replication and repair.Critical reviews in biochemistry and molecular biology · 2026
    Review
  3. Article
  4. Article
  5. Review
  6. Review
  7. Review
  8. Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Review
  19. Two interaction surfaces between XPA and RPA organize the preincision complex in nucleotide excision repair.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 4 institutions in 1 country.

Susan E TsutakawaMolecular Biophysics and Integrated Bioimaging, Lawrence Berkeley National Laboratory, Berkeley, CA 94720; setsutakawa@lbl.gov jdg@med.unc.edu PKCooper@lbl.gov jatainer@gmail.com.ORCID 0000-0002-4918-4571
Altaf H SarkerBiological Systems and Engineering, Lawrence Berkeley National Laboratory, Berkeley, CA 94720.ORCID 0000-0001-6868-8460
Clifford NgBiological Systems and Engineering, Lawrence Berkeley National Laboratory, Berkeley, CA 94720.ORCID 0000-0002-8581-7938
Andrew S ArvaiIntegrative Structural & Computational Biology, The Scripps Research Institute, La Jolla, CA 92037.
David S ShinMolecular Biophysics and Integrated Bioimaging, Lawrence Berkeley National Laboratory, Berkeley, CA 94720.
Brian ShihBiological Systems and Engineering, Lawrence Berkeley National Laboratory, Berkeley, CA 94720.
Shuai JiangBiological Systems and Engineering, Lawrence Berkeley National Laboratory, Berkeley, CA 94720.
Aye C ThwinBiological Systems and Engineering, Lawrence Berkeley National Laboratory, Berkeley, CA 94720.
Miaw-Sheue TsaiBiological Systems and Engineering, Lawrence Berkeley National Laboratory, Berkeley, CA 94720.
Alexandra WillcoxLineberger Comprehensive Cancer Center, University of North Carolina, Chapel Hill, NC 27599.
Mai Zong HerMolecular Biophysics and Integrated Bioimaging, Lawrence Berkeley National Laboratory, Berkeley, CA 94720.
Kelly S TregoBiological Systems and Engineering, Lawrence Berkeley National Laboratory, Berkeley, CA 94720.
Alan G RaetzBiological Systems and Engineering, Lawrence Berkeley National Laboratory, Berkeley, CA 94720.
Daniel RosenbergMolecular Biophysics and Integrated Bioimaging, Lawrence Berkeley National Laboratory, Berkeley, CA 94720.ORCID 0000-0001-8017-8156
Albino BacollaDepartment of Cancer Biology, University of Texas MD Anderson Cancer Center, Houston, TX 77030.ORCID 0000-0003-0206-8423
Michal HammelMolecular Biophysics and Integrated Bioimaging, Lawrence Berkeley National Laboratory, Berkeley, CA 94720.ORCID 0000-0002-5610-9289
Jack D GriffithLineberger Comprehensive Cancer Center, University of North Carolina, Chapel Hill, NC 27599 setsutakawa@lbl.gov jdg@med.unc.edu PKCooper@lbl.gov jatainer@gmail.com.
Priscilla K CooperBiological Systems and Engineering, Lawrence Berkeley National Laboratory, Berkeley, CA 94720; setsutakawa@lbl.gov jdg@med.unc.edu PKCooper@lbl.gov jatainer@gmail.com.ORCID 0000-0002-3563-3647
John A TainerMolecular Biophysics and Integrated Bioimaging, Lawrence Berkeley National Laboratory, Berkeley, CA 94720; setsutakawa@lbl.gov jdg@med.unc.edu PKCooper@lbl.gov jatainer@gmail.com.ORCID 0000-0003-1659-2429
Lawrence Berkeley National Laboratory · USThe University of Texas MD Anderson Cancer Center · USUniversity of North Carolina at Chapel Hill · USScripps Research Institute · US

Funding

Tumor Evolution and Metastasis ProgramP30CA016672 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI Scott Kopetz · 1985 to 2026
$290.8M
Transcription-Coupled & Replication-Associated Excision RepairP01CA092584 · NCI · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI John A. Tainer · 2001 to 2026
$89.6M
THE IMPACT OF CELLULAR DEFENSE ON THE ROLE OF Ku80 IN GENOME MAINTENANCE AND LONGP01AG017242 · NIA · UNIVERSITY OF TEXAS HLTH SCI CTR SAN ANT · PI VIJG, JAN · 1999 to 2023
$46.1M
User Training and OutreachP30GM124169 · NIGMS · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI PAUL David ADAMS, Gregory L Hura · 2017 to 2026
$28.6M
Training in Basic Research on Aging and Age-Related DiseaseT32AG000266 · NIA · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI Lisa M Ellerby · 1998 to 2026
$13.8M
Mesoscale and Nanoscale Technologies Integrated by Structures for DNA Repair Complexes (MANTIS-DRC)R35CA220430 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI John A. Tainer · 2018 to 2026
$7.6M
HOMOLOOUS RECOMBINATION: ITS MOLECULAR CYTOLOGYR01GM031819 · NIGMS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI GRIFFITH, JACK D · 1985 to 2017
$5.2M
Nucleoprotein structures formed at sites of DNA damageR01ES013773 · NIEHS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI GRIFFITH, JACK D · 2005 to 2015
$3.2M
Novel Interactions of DNA Repair Processes in Replication Fork MaintenanceR01ES019935 · NIEHS · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI COOPER, PRISCILLA K. · 2012 to 2016
$2.0M
R-loops at the telomere as a toxic source of genomic instabilityR01ES031635 · NIEHS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI GRIFFITH, JACK D · 2020 to 2024
$1.7M
Integrative modeling of PCNA assemblies engaged in genome duplication and repairR01GM110387 · NIGMS · GEORGIA STATE UNIVERSITY · PI IVANOV, IVAYLO NIKOLAEV · 2015 to 2019
$1.7M
NCI NIH HHS P01 CA092584NCI NIH HHS R35 CA220430NIA NIH HHS P01 AG017242NIA NIH HHS T32 AG000266NIEHS NIH HHS R01 ES013773NIEHS NIH HHS R01 ES019935NIGMS NIH HHS P30 GM124169NIGMS NIH HHS R01 GM031819NIGMS NIH HHS R01 GM110387
6 · The paper itself

Abstract

Xeroderma pigmentosum group G (XPG) protein is both a functional partner in multiple DNA damage responses (DDR) and a pathway coordinator and structure-specific endonuclease in nucleotide excision repair (NER). Different mutations in the XPG gene

Indexed as

Point MutationBinding SitesCockayne SyndromeConserved SequenceDNADNA-Binding ProteinsDNA Excision Repair Protein ERCC-5EndonucleasesEnzyme StabilityHumansMolecular Dynamics SimulationNuclear ProteinsPhenotypeProtein BindingProtein FoldingProtein MultimerizationDNADNA-Binding ProteinsDNA Excision Repair Protein ERCC-5EndonucleasesNuclear ProteinsTranscription Factorscrystallographycrystal structureelectron microscopyendonucleaseERCC5

Identifiers

PMID32522879
PMCPMC7321962
OpenAlexW3033172925

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.