Evidence map›Paper›PMID 32522778›Full record

ArticlemSphere2020

Combining Whole-Genome Sequencing and Multimodel Phenotyping To Identify Genetic Predictors of

Alanna Crouse, Catherine Schramm, Jean-Guillaume Emond-Rheault, Adrian Herod, Maud Kerhoas, John Rohde, Samantha Gruenheid, Irena Kukavica-Ibrulj, Brian Boyle, Celia M T Greenwood and 5 more

Open access · goldAbstract read
In one paragraph

Article in mSphere, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Whole-Genome Sequencing Analysis of Non-TyphoidalAntibiotics (Basel, Switzerland) · 2023
    Article
  3. Review
  4. Article
  5. Article
  6. Panomics to decode virulence and fitness in Gram-negative bacteria.Frontiers in cellular and infection microbiology · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 8 institutions in 1 country.

Alanna Crouse *McGill Research Center on Complex Traits, McGill University, Montreal, Quebec, Canada.
Catherine Schramm *Lady Davis Institute for Medical Research, Montreal, Quebec, Canada.
Jean-Guillaume Emond-Rheault *Institute for Integrative and Systems Biology, Faculty of Medicine, Université Laval, Quebec City, Quebec, Canada.
Adrian Herod *Department of Microbiology and Immunology, Dalhousie University, Halifax, Nova Scotia, Canada.
Maud KerhoasDépartement de Microbiologie, Infectiologie et Immunologie, Université de Montréal, Montreal, Quebec, Canada.
John RohdeDepartment of Microbiology and Immunology, Dalhousie University, Halifax, Nova Scotia, Canada.
Samantha GruenheidMcGill Research Center on Complex Traits, McGill University, Montreal, Quebec, Canada.
Irena Kukavica-IbruljInstitute for Integrative and Systems Biology, Faculty of Medicine, Université Laval, Quebec City, Quebec, Canada.
Brian BoyleInstitute for Integrative and Systems Biology, Faculty of Medicine, Université Laval, Quebec City, Quebec, Canada.
Celia M T GreenwoodLady Davis Institute for Medical Research, Montreal, Quebec, Canada.
Lawrence D GoodridgeFood Science Department, University of Guelph, Guelph, Ontario, Canada.
Rafael GardunoCanadian Food Inspection Agency, Dartmouth Laboratory, Dartmouth, Nova Scotia, Canada.
Roger C LevesqueInstitute for Integrative and Systems Biology, Faculty of Medicine, Université Laval, Quebec City, Quebec, Canada.
Danielle MaloMcGill Research Center on Complex Traits, McGill University, Montreal, Quebec, Canada danielle.malo@mcgill.ca france.daigle@umontreal.ca.
France DaigleDépartement de Microbiologie, Infectiologie et Immunologie, Université de Montréal, Montreal, Quebec, Canada danielle.malo@mcgill.ca france.daigle@umontreal.ca.ORCID 0000-0001-6847-4729
Université Laval · CAMcGill University · CADalhousie University · CAJewish General Hospital · CACanadian Food Inspection Agency · CAFonds de Recherche du Québec – Nature et Technologies · CAUniversité de Montréal · CAUniversity of Guelph · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

PubMed holds no abstract for this paper.

Indexed as

Genome, BacterialVirulenceAcanthamoebaAnimalsDisease Models, AnimalEpithelial CellsFemaleGenomicsHumansMacrophagesMaleMiceMice, Inbred C57BLPhenotypePhylogenySalmonellaamoebaepithelial cellsfood safetyhost cell interactionmacrophagespredictionSalmonellasystemic infectionvirulencewhole-genome sequencing

Identifiers

PMID32522778
PMCPMC7289705
OpenAlexW3033763368

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.