Evidence map›Paper›PMID 32521228›Full record

ArticleStructure (London, England : 1993)2020

Structural Basis for the Activation and Target Site Specificity of CDC7 Kinase.

Samual D Dick, Stefania Federico, Siobhan M Hughes, Valerie E Pye, Nicola O'Reilly, Peter Cherepanov

Open access · hybridAbstract read
In one paragraph

Article in Structure (London, England : 1993), 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.1field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 19 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Article
  6. CDC7 as a novel biomarker and druggable target in cancer.Clinical & translational oncology : official publication of the Federation of Spanish Oncology Societies and of the National Cancer Institute of Mexico · 2022
    Review
  7. Article
  8. Article
  9. Article
  10. CDC7 Expression in Selected Odontogenic Tumors.International journal of dentistry · 2022
    Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Samual D DickChromatin Structure and Mobile DNA, The Francis Crick Institute, London NW1 1AT, UK.
Stefania FedericoPeptide Synthesis Laboratory, The Francis Crick Institute, London NW1 1AT, UK.
Siobhan M HughesChromatin Structure and Mobile DNA, The Francis Crick Institute, London NW1 1AT, UK.
Valerie E PyeChromatin Structure and Mobile DNA, The Francis Crick Institute, London NW1 1AT, UK.
Nicola O'ReillyPeptide Synthesis Laboratory, The Francis Crick Institute, London NW1 1AT, UK.
Peter CherepanovChromatin Structure and Mobile DNA, The Francis Crick Institute, London NW1 1AT, UK; Division of Medicine, Imperial College London, London W2 1PG, UK. Electronic address: peter.cherepanov@crick.ac.uk.
The Francis Crick Institute · GB

Funding

Wellcome Trust FC001061
6 · The paper itself

Abstract

CDC7 is an essential Ser/Thr kinase that acts upon the replicative helicase throughout the S phase of the cell cycle and is activated by DBF4. Here, we present crystal structures of a highly active human CDC7-DBF4 construct. The structures reveal a zinc-finger domain at the end of the kinase insert 2 that pins the CDC7 activation loop to motif M of DBF4 and the C lobe of CDC7. These interactions lead to ordering of the substrate-binding platform and full opening of the kinase active site. In a co-crystal structure with a mimic of MCM2 Ser40 phosphorylation target, the invariant CDC7 residues Arg373 and Arg380 engage phospho-Ser41 at substrate P+1 position, explaining the selectivity of the S-phase kinase for Ser/Thr residues followed by a pre-phosphorylated or an acidic residue. Our results clarify the role of DBF4 in activation of CDC7 and elucidate the structural basis for recognition of its preferred substrates.

Indexed as

Catalytic DomainCell Cycle ProteinsHumansMolecular Docking SimulationPhosphorylationProtein BindingProtein Serine-Threonine KinasesSubstrate SpecificityZinc FingersCDC7 protein, humanCell Cycle ProteinsDBF4 protein, humanProtein Serine-Threonine KinasesbisubstrateCDC7cell cyclecrystal structureDBF4DDKkinasekinase inhibitorXL413zinc-binding domain

Identifiers

PMID32521228
PMCPMC7416108
OpenAlexW3033100644

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.