Evidence map›Paper›PMID 32519082›Full record

ArticleActa neuropathologica2020

Patient-derived orthotopic xenografts of pediatric brain tumors: a St. Jude resource.

Kyle S Smith, Ke Xu, Kimberly S Mercer, Frederick Boop, Paul Klimo, Michael DeCupyere, Jose Grenet, Sarah Robinson, Paige Dunphy, Suzanne J Baker and 9 more

Open access · hybridAbstract read
In one paragraph

Article in Acta neuropathologica, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 54 papers.

0numbers the graph read from it
0cells of the map it votes in
54citing papers in PubMed
5.7field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

54 citing papers in PubMed, 69 citations in OpenAlex.

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  18. Medulloblastoma: biology and immunotherapy.Frontiers in immunology · 2025
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 2 institutions in 1 country.

Kyle S Smith *Department of Developmental Neurobiology, St. Jude Children's Research Hospital, Memphis, TN, USA.
Ke Xu *Department of Computational Biology and Center for Applied Genetics, St. Jude Children's Research Hospital, Memphis, TN, USA.
Kimberly S MercerDepartment of Tumor Cell Biology, St. Jude Children's Research Hospital, Memphis, TN, USA.
Frederick BoopDepartment of Surgery, Le Bonheur Children's Hospital, Memphis, TN, USA.
Paul KlimoDepartment of Surgery, Le Bonheur Children's Hospital, Memphis, TN, USA.
Michael DeCupyereDepartment of Surgery, Le Bonheur Children's Hospital, Memphis, TN, USA.
Jose GrenetDepartment of Tumor Cell Biology, St. Jude Children's Research Hospital, Memphis, TN, USA.
Sarah RobinsonDepartment of Tumor Cell Biology, St. Jude Children's Research Hospital, Memphis, TN, USA.
Paige DunphyDepartment of Developmental Neurobiology, St. Jude Children's Research Hospital, Memphis, TN, USA.
Suzanne J BakerDepartment of Developmental Neurobiology, St. Jude Children's Research Hospital, Memphis, TN, USA.
David W EllisonDepartment of Pathology, St. Jude Children's Research Hospital, Memphis, TN, USA.
Thomas E MerchantDepartment of Radiation Oncology, St. Jude Children's Research Hospital, Memphis, TN, USA.
Santhosh A UpadayayaDepartment of Oncology, St. Jude Children's Research Hospital, Memphis, TN, USA.
Amar GajjarDepartment of Oncology, St. Jude Children's Research Hospital, Memphis, TN, USA.
Gang WuDepartment of Computational Biology and Center for Applied Genetics, St. Jude Children's Research Hospital, Memphis, TN, USA.
Brent A OrrDepartment of Pathology, St. Jude Children's Research Hospital, Memphis, TN, USA.
Giles W Robinson *Department of Oncology, St. Jude Children's Research Hospital, Memphis, TN, USA.
Paul A Northcott *Department of Developmental Neurobiology, St. Jude Children's Research Hospital, Memphis, TN, USA.
Martine F Roussel *Department of Tumor Cell Biology, St. Jude Children's Research Hospital, Memphis, TN, USA. martine.roussel@stjude.org.ORCID http://orcid.org/0000-0002-1740-8139
St. Jude Children's Research Hospital · USLe Bonheur Children's Hospital · US

Funding

Viral Vector Technology (VVTSR)P30CA021765 · NCI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI CHARLES ROBERTS · 1985 to 2026
$166.9M
The DNA Damage Response and Tumorigenesis in the BrainP01CA096832 · NCI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI BAKER, SUZANNE J. · 2003 to 2025
$38.0M
Dissecting the Spectrum, Prevalence, and Molecular Mechanisms of Enhancer Hijacking in MedulloblastomaR01CA232143 · NCI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI NORTHCOTT, PAUL · 2018 to 2022
$1.9M
NCI NIH HHS P01 CA096832NCI NIH HHS P30 CA021765NCI NIH HHS R01 CA232143
6 · The paper itself

Abstract

Pediatric brain tumors are the leading cause of cancer-related death in children. Patient-derived orthotopic xenografts (PDOX) of childhood brain tumors have recently emerged as a biologically faithful vehicle for testing novel and more effective therapies. Herein, we provide the histopathological and molecular analysis of 37 novel PDOX models generated from pediatric brain tumor patients treated at St. Jude Children's Research Hospital. Using a combination of histopathology, whole-genome and whole-exome sequencing, RNA-sequencing, and DNA methylation arrays, we demonstrate the overall fidelity and inter-tumoral molecular heterogeneity of pediatric brain tumor PDOX models. These models represent frequent as well as rare childhood brain tumor entities, including medulloblastoma, ependymoma, atypical teratoid rhabdoid tumor, and embryonal tumor with multi-layer rosettes. PDOX models will be valuable platforms for evaluating novel therapies and conducting pre-clinical trials to accelerate progress in the treatment of brain tumors in children. All described PDOX models and associated datasets can be explored using an interactive web-based portal and will be made freely available to the research community upon request.

Indexed as

Brain NeoplasmsDisease Models, AnimalHeterograftsAnimalsChildHumansMiceAT/RTEpendymomaETMRMedulloblastomaPDOXPediatric brain tumors

Identifiers

PMID32519082
PMCPMC7360541
OpenAlexW3032992192

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.