Evidence map›Paper›PMID 32513732›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2020

H1 linker histones silence repetitive elements by promoting both histone H3K9 methylation and chromatin compaction.

Sean E Healton, Hugo D Pinto, Laxmi N Mishra, Gregory A Hamilton, Justin C Wheat, Kalina Swist-Rosowska, Nicholas Shukeir, Yali Dou, Ulrich Steidl, Thomas Jenuwein and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 57 papers.

0numbers the graph read from it
0cells of the map it votes in
57citing papers in PubMed
5.6field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

57 citing papers in PubMed, 92 citations in OpenAlex.

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  11. Linker histone regulates the myeloid versus lymphoid bifurcation of multipotent hematopoietic stem and progenitors.Proceedings of the National Academy of Sciences of the United States of America · 2025
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 2 countries.

Sean E HealtonDepartment of Cell Biology, Albert Einstein College of Medicine, Bronx, NY 10461; sean.healton@einsteinmed.org arthur.skoultchi@einsteinmed.org.ORCID 0000-0003-2506-4185
Hugo D PintoDepartment of Cell Biology, Albert Einstein College of Medicine, Bronx, NY 10461.ORCID 0000-0002-6970-4693
Laxmi N MishraDepartment of Cell Biology, Albert Einstein College of Medicine, Bronx, NY 10461.ORCID 0000-0002-6596-9651
Gregory A HamiltonDepartment of Cell Biology, Albert Einstein College of Medicine, Bronx, NY 10461.ORCID 0000-0002-7844-597X
Justin C WheatDepartment of Cell Biology, Albert Einstein College of Medicine, Bronx, NY 10461.ORCID 0000-0003-0018-4981
Kalina Swist-RosowskaMax Planck Institute of Immunobiology and Epigenetics, Stübeweg 51, Freiburg D-79108, Germany.ORCID 0000-0003-2024-3715
Nicholas ShukeirMax Planck Institute of Immunobiology and Epigenetics, Stübeweg 51, Freiburg D-79108, Germany.ORCID 0000-0002-7864-6958
Yali DouDepartment of Pathology, University of Michigan, Ann Arbor, MI 48109.ORCID 0000-0002-4040-1429
Ulrich SteidlDepartment of Cell Biology, Albert Einstein College of Medicine, Bronx, NY 10461.
Thomas JenuweinMax Planck Institute of Immunobiology and Epigenetics, Stübeweg 51, Freiburg D-79108, Germany.ORCID 0000-0002-0470-0421
Matthew J GambleDepartment of Cell Biology, Albert Einstein College of Medicine, Bronx, NY 10461.
Arthur I SkoultchiDepartment of Cell Biology, Albert Einstein College of Medicine, Bronx, NY 10461; sean.healton@einsteinmed.org arthur.skoultchi@einsteinmed.org.ORCID 0000-0001-5096-8077
Albert Einstein College of Medicine · USMax Planck Institute of Immunobiology and Epigenetics · DEUniversity of Michigan · US

Funding

WORD PROCESSORP30CA013330 · NCI · YESHIVA UNIVERSITY · PI STEVEN C. ALMO · 1985 to 2026
$111.2M
MEDICAL SCIENTIST TRAINING PROGRAMT32GM007288 · NIGMS · YESHIVA UNIVERSITY · PI AKABAS, MYLES H. · 1985 to 2022
$35.6M
The role of macroH2A variants in cancer and senescenceR01CA155232 · NCI · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI GAMBLE, MATTHEW J · 2012 to 2021
$3.7M
Functions of Mammalian H1 Linker Histones in Gene Regulation and DevelopmentR01GM116143 · NIGMS · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI SKOULTCHI, ARTHUR I · 2015 to 2018
$1.9M
Regulation of Nuclear Functions by Drosophila Linker Histone H1R01GM129244 · NIGMS · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI FYODOROV, DMITRY V, SKOULTCHI, ARTHUR I · 2018 to 2021
$1.5M
Epigenetic activity of normal and cancer-associated mutant H1 linker histonesF30CA210539 · NCI · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI HEALTON, SEAN · 2016 to 2019
$177k
NCI NIH HHS F30 CA210539NCI NIH HHS P30 CA013330NCI NIH HHS R01 CA155232NIGMS NIH HHS R01 GM116143NIGMS NIH HHS R01 GM129244NIGMS NIH HHS T32 GM007288
6 · The paper itself

Abstract

Nearly 50% of mouse and human genomes are composed of repetitive sequences. Transcription of these sequences is tightly controlled during development to prevent genomic instability, inappropriate gene activation and other maladaptive processes. Here, we demonstrate an integral role for H1 linker histones in silencing repetitive elements in mouse embryonic stem cells. Strong H1 depletion causes a profound de-repression of several classes of repetitive sequences, including major satellite, LINE-1, and ERV. Activation of repetitive sequence transcription is accompanied by decreased H3K9 trimethylation of repetitive sequence chromatin. H1 linker histones interact directly with Suv39h1, Suv39h2, and SETDB1, the histone methyltransferases responsible for H3K9 trimethylation of chromatin within these regions, and stimulate their activity toward chromatin in vitro. However, we also implicate chromatin compaction mediated by H1 as an additional, dominant repressive mechanism for silencing of repetitive major satellite sequences. Our findings elucidate two distinct, H1-mediated pathways for silencing heterochromatin.

Indexed as

AnimalsChromatinEpigenomicsHeterochromatinHistone-Lysine N-MethyltransferaseHistonesMethylationMethyltransferasesMiceMouse Embryonic Stem CellsRepetitive Sequences, Nucleic AcidRepressor ProteinsChromatinHeterochromatinHistone-Lysine N-MethyltransferaseHistonesMethyltransferasesRepressor ProteinsSETDB1 protein, mouseSuv39h1 protein, mouseSuv39h2 protein, mousechromatinepigeneticslinker histonesrepetitive elements

Identifiers

PMID32513732
PMCPMC7322038
OpenAlexW3033675475

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.