Evidence map›Paper›PMID 32513305›Full record

ArticleClinical epigenetics2020

The signature of HBV-related liver disease in peripheral blood mononuclear cell DNA methylation.

Kang Li, Ling Qin, Sanjie Jiang, Ang Li, Chi Zhang, Guihai Liu, Jianping Sun, Huanqing Sun, Yan Zhao, Ning Li and 1 more

Open access · goldAbstract read
In one paragraph

Article in Clinical epigenetics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 25 citations in OpenAlex.

  1. Review
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  8. Exploration of the Effect on Genome-Wide DNA Methylation byInternational journal of molecular sciences · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 2 countries.

Kang LiBiomedical Information Center, Beijing You'An Hospital, Capital Medical University, Beijing, China.
Ling QinBiomedical Information Center, Beijing You'An Hospital, Capital Medical University, Beijing, China.
Sanjie JiangSt. Edmunds College, Cambridge, CB3 0BN, UK.
Ang LiBiomedical Information Center, Beijing You'An Hospital, Capital Medical University, Beijing, China.
Chi ZhangBiomedical Information Center, Beijing You'An Hospital, Capital Medical University, Beijing, China.
Guihai LiuBiomedical Information Center, Beijing You'An Hospital, Capital Medical University, Beijing, China.
Jianping SunBiomedical Information Center, Beijing You'An Hospital, Capital Medical University, Beijing, China.
Huanqing SunBiomedical Information Center, Beijing You'An Hospital, Capital Medical University, Beijing, China.
Yan ZhaoClinical Laboratory Center, Beijing You'An hospital, Capital Medical University, Beijing, China.
Ning LiDepartments of Hepatobiliary Surgery, Beijing You'An Hospital, Capital Medical University, Beijing, China. liningya@ccmu.edu.cn.
Yonghong ZhangBiomedical Information Center, Beijing You'An Hospital, Capital Medical University, Beijing, China. 13810108505@163.com.
Capital Medical University · CNBeijing YouAn Hospital · CNUniversity of Oxford · GBWest Suffolk College · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundHepatitis B virus (HBV)-related liver disease induces liver damage by hepatic immune and inflammatory response. The association between aberrant peripheral blood mononuclear cell (PBMC) DNA methylation and progression of liver disease and fibrosis remains unclear.

resultsHere we applied Infinium 450 K BeadChip investigating PBMC genome-wide methylation profiling of 48 HBV-related liver disease patients including 24 chronic hepatitis B (CHB), 14 compensated liver cirrhosis (LC), and 10 decompensated liver cirrhosis (DLC). In total, there were 7888 differentially methylated CpG sites (36.06% hypermethylation, 63.94% hypomethylation) correlate with liver disease progression. LC was difficult to be diagnosed, intermediating between CHB and DLC. We used least absolute shrinkage and selection operator (LASSO)-logistic regression method to perform a LC predictive model. The predicted probability (P) of having LC was estimated by the combined model: P = 1/(1 - e

conclusionsThese data support idea that development of HBV-related chronic liver disease is linked with robust and broad alteration of methylation in peripheral immune system. CpG methylation sites serve as relevant biomarker candidates to monitor and diagnose LC, providing new insight into the immune mechanisms understanding the progression of HBV-related liver fibrosis and cirrhosis.

Indexed as

AdultCase-Control StudiesCpG IslandsDisease ProgressionDNA MethylationEpigenesis, GeneticFemaleFibrosisHepatitis B, ChronicHepatitis B virusHigh-Throughput Nucleotide SequencingHumansLeukocytes, MononuclearLiver CirrhosisLiver DiseasesMaleDNA methylationFibrosis progressionHBV-related liver diseaseImmune-related pathwaysLC predictive model

Identifiers

PMID32513305
PMCPMC7278209
OpenAlexW3033068874

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.