Evidence map›Paper›PMID 32511891›Full record

ArticleMolecular genetics & genomic medicine2020

Application of exome sequencing to diagnose a novel presentation of the Cornelia de Lange syndrome in an Afro-Caribbean family.

Wayne Thompson, Patrick Z Carey, Tyhiesia Donald, Beverly Nelson, Elizabeth J Bhoj, Dong Li, Hakon Hakonarson, Maricela Ramirez, Sarah H Elsea, Janice L Smith and 2 more

Open access · goldAbstract readCase Reports
In one paragraph

Article in Molecular genetics & genomic medicine, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.2field-weighted citation impact, top 50% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 2 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 2 countries.

Wayne ThompsonDepartment of Biochemistry, St. George's University School of Medicine, St. George's, Grenada.
Patrick Z CareyDepartment of Biochemistry, St. George's University School of Medicine, St. George's, Grenada.
Tyhiesia DonaldPediatrics Ward, Grenada General Hospital, St. George's, Grenada.
Beverly NelsonPediatrics Ward, Grenada General Hospital, St. George's, Grenada.
Elizabeth J BhojCenter for Applied Genomics, The Children's Hospital of Philadelphia, Philadelphia, PA, USA.
Dong LiCenter for Applied Genomics, The Children's Hospital of Philadelphia, Philadelphia, PA, USA.ORCID 0000-0002-2265-6727
Hakon HakonarsonCenter for Applied Genomics, The Children's Hospital of Philadelphia, Philadelphia, PA, USA.
Maricela RamirezDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX, USA.
Sarah H ElseaDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX, USA.ORCID 0000-0002-1400-8519
Janice L SmithDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX, USA.
John C CareyDepartment of Pediatrics, University of Utah Health, Salt Lake City, UT, USA.ORCID 0000-0002-6007-8518
Andrew K SoberingDepartment of Biochemistry, St. George's University School of Medicine, St. George's, Grenada.ORCID 0000-0002-9251-2614
St. George's University · GDBaylor College of Medicine · USChildren's Hospital of Philadelphia · USUniversity of Utah · US

Funding

The Intellectual and Developmental Disabilities Research Center (IDDRC) at CHOP/PennP50HD105354 · NICHD · CHILDREN'S HOSP OF PHILADELPHIA · PI ERIC D MARSH, ROBERT Thomas SCHULTZ · 2021 to 2026
$9.2M
The Intellectual and Developmental Disabilities Research Center at CHOP/PennU54HD086984 · NICHD · CHILDREN'S HOSP OF PHILADELPHIA · PI SCHULTZ, ROBERT THOMAS · 2016 to 2020
$6.3M
NICHD NIH HHS P50 HD105354NICHD NIH HHS U54 HD086984
6 · The paper itself

Abstract

backgroundCornelia de Lange syndrome (CdLS) comprises a recognizable pattern of multiple congenital anomalies caused by variants of the DNA cohesion complex. Affected individuals may display a wide range of phenotypic severity, even within the same family.

methodsExome sequencing and confirmatory Sanger sequencing showed the same previously described p.Arg629Ter NIPBL variant in two half-brothers affected with CdLS. Clinical evaluations were obtained in a pro bono genetics clinic.

resultsOne brother had relatively mild proportionate limb shortening; the other had complete bilateral hypogenesis of the upper arm with absence of lower arm structures, terminal transverse defects, and no digit remnants. His complex lower limb presentation included long bone deficiency and a deviated left foot. The mother had intellectual disability and microcephaly but lacked facial features diagnostic of the CdLS.

conclusionWe describe a collaboration between a pediatrics team from a resource-limited nation and USA-based medical geneticists. Reports describing individuals of West Indian ancestry are rarely found in the medical literature. Here, we present a family of Afro-Caribbean ancestry with CdLS presenting with phenotypic variability, including unusual lower limb abnormalities. The observation of this novel family adds to our knowledge of the phenotypic and molecular aspects of CdLS.

Indexed as

PhenotypeAdultCell Cycle ProteinsChildDe Lange SyndromeExome SequencingFemaleGenetic TestingHumansMaleMutationPedigreeCell Cycle ProteinsNIPBL protein, humanCaribbeanCornelia de Lange syndromeexome sequencing

Identifiers

PMID32511891
PMCPMC7434751
OpenAlexW3034071319

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.