Evidence map›Paper›PMID 32511303›Full record

ArticlebioRxiv : the preprint server for biology2020

Coronavirus infection and PARP expression dysregulate the NAD Metabolome: an actionable component of innate immunity.

Collin D Heer, Daniel J Sanderson, Lynden S Voth, Yousef M O Alhammad, Mark S Schmidt, Samuel A J Trammell, Stanley Perlman, Michael S Cohen, Anthony R Fehr, Charles Brenner

Open access · greenAbstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 28 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Collin D HeerFree Radical and Radiation Biology Program, Department of Radiation Oncology, University of Iowa, Iowa City, IA, USA.
Daniel J SandersonDepartment of Chemical Physiology & Biochemistry, Oregon Health Sciences University, Portland, OR, USA.
Lynden S VothDepartment of Molecular Biosciences, University of Kansas, Lawrence, KS, USA.
Yousef M O AlhammadDepartment of Molecular Biosciences, University of Kansas, Lawrence, KS, USA.
Mark S SchmidtDepartment of Biochemistry, University of Iowa, Iowa City, IA, USA.
Samuel A J TrammellDepartment of Biochemistry, University of Iowa, Iowa City, IA, USA.
Stanley PerlmanDepartment of Microbiology & Immunology, University of Iowa, Iowa City, IA, USA.
Michael S CohenDepartment of Chemical Physiology & Biochemistry, Oregon Health Sciences University, Portland, OR, USA.
Anthony R FehrDepartment of Molecular Biosciences, University of Kansas, Lawrence, KS, USA.
Charles BrennerDepartment of Biochemistry, University of Iowa, Iowa City, IA, USA.
University of Iowa · USUniversity of Kansas · USOregon Health & Science University · US

Funding

Synthetic Chemical Biology CoreP20GM113117 · NIGMS · UNIVERSITY OF KANSAS LAWRENCE · PI OROZCO, ROBIN C. · 2016 to 2025
$23.9M
SARS-CoV Proteins in Heterologous Viral InfectionP01AI060699 · NIAID · UNIVERSITY OF IOWA · PI PERLMAN, STANLEY · 2004 to 2021
$21.5M
PREDOCTORAL TRAINING PROGRAM IN GENETICST32GM008629 · NIGMS · UNIVERSITY OF IOWA · PI EBERL, DANIEL F · 1997 to 2021
$4.1M
The SIRT1-Gpd1L-NAD+ interactome in regulation of the Neuronal Sodium Channel: Implications for Cognitive Impairment of Alzheimer’s DementiaR01HL147545 · NHLBI · UNIVERSITY OF IOWA · PI BRENNER, CHARLES M, IRANI, KAIKOBAD J. · 2019 to 2022
$2.9M
Role of anti-SARS-CoV T cell response in pathogenesisR01AI091322 · NIAID · UNIVERSITY OF IOWA · PI PERLMAN, STANLEY · 2011 to 2015
$1.9M
Elucidating and exploiting NAD metabolic defects in cancerK00CA245722 · NCI · YALE UNIVERSITY · PI HEER, COLLIN DAVID · 2021 to 2024
$378k
Investigating How ADP-ribosylation Impacts Innate Immunity During Coronavirus InfectionK22AI134993 · NIAID · UNIVERSITY OF KANSAS LAWRENCE · PI FEHR, ANTHONY R · 2019 to 2020
$270k
Selective targeting of tumor cell redox metabolism and DNA damage responses to enhance cancer therapyF99CA245722 · NCI · UNIVERSITY OF IOWA · PI HEER, COLLIN DAVID · 2019 to 2020
$65k
NCI NIH HHS F99 CA245722NCI NIH HHS K00 CA245722NHLBI NIH HHS R01 HL147545NIAID NIH HHS K22 AI134993NIAID NIH HHS P01 AI060699NIAID NIH HHS R01 AI091322NIGMS NIH HHS P20 GM113117NIGMS NIH HHS T32 GM008629
6 · The paper itself

Abstract

Poly-ADP-ribose polymerase (PARP) superfamily members covalently link either a single ADP-ribose (ADPR) or a chain of ADPR units to proteins using nicotinamide adenine dinucleotide (NAD) as the source of ADPR. While the well-known poly-ADP-ribosylating (PARylating) PARPs primarily function in the DNA damage response, many non-canonical mono-ADP-ribosylating (MARylating) PARPs are associated with cellular antiviral responses. We recently demonstrated robust upregulation of several PARPs following infection with Murine Hepatitis Virus (MHV), a model coronavirus. Here we show that SARS-CoV-2 infection strikingly upregulates MARylating PARPs and induces the expression of genes encoding enzymes for salvage NAD synthesis from nicotinamide (NAM) and nicotinamide riboside (NR), while downregulating other NAD biosynthetic pathways. We show that overexpression of PARP10 is sufficient to depress cellular NAD and that the activities of the transcriptionally induced enzymes PARP7, PARP10, PARP12 and PARP14 are limited by cellular NAD and can be enhanced by pharmacological activation of NAD synthesis. We further demonstrate that infection with MHV induces a severe attack on host cell NAD

Indexed as

ADP-ribosylationCOVID-19interferonnicotinamide adenine dinucleotide (NAD)poly(ADP-ribose) polymerase (PARP)Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)transcriptomics

Identifiers

PMID32511303
PMCPMC7217258
OpenAlexW3016509150

What OpenQuestion holds

Textmetadata
LicenceCC BY-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.