Evidence map›Paper›PMID 32510467›Full record

ArticleActa crystallographica. Section F, Structural biology communications2020

Crystal structure of the SH3 domain of growth factor receptor-bound protein 2.

Alexandr Bolgov, Svetlana Korban, Dmitrii Luzik, Vladimir Zhemkov, Meewhi Kim, Olga Rogacheva, Ilya Bezprozvanny

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In one paragraph

Article in Acta crystallographica. Section F, Structural biology communications, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.3field-weighted citation impact, top 43% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 7 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 2 countries.

Alexandr BolgovLaboratory of Molecular Neurodegeneration, Institute of Biomedical systems and Biotechnologies, Peter the Great St Petersburg Polytechnic University, St Petersburg 194021, Russian Federation.
Svetlana KorbanLaboratory of Molecular Neurodegeneration, Institute of Biomedical systems and Biotechnologies, Peter the Great St Petersburg Polytechnic University, St Petersburg 194021, Russian Federation.
Dmitrii LuzikLaboratory of Biomolecular NMR, St Petersburg State University, St Petersburg 199034, Russian Federation.
Vladimir ZhemkovLaboratory of Molecular Neurodegeneration, Institute of Biomedical systems and Biotechnologies, Peter the Great St Petersburg Polytechnic University, St Petersburg 194021, Russian Federation.
Meewhi KimDepartment of Physiology, UT Southwestern Medical Center at Dallas, Dallas, TX 75390, USA.
Olga RogachevaLaboratory of Biomolecular NMR, St Petersburg State University, St Petersburg 199034, Russian Federation.
Ilya BezprozvannyLaboratory of Molecular Neurodegeneration, Institute of Biomedical systems and Biotechnologies, Peter the Great St Petersburg Polytechnic University, St Petersburg 194021, Russian Federation.
Peter the Great St. Petersburg Polytechnic University · RUSt Petersburg University · RUSouthwestern Medical Center · USThe University of Texas Southwestern Medical Center · US

Funding

Russian Scientific Fund 19-15-00184
6 · The paper itself

Abstract

This study presents the crystal structure of the N-terminal SH3 (SH3N) domain of growth factor receptor-bound protein 2 (Grb2) at 2.5 Å resolution. Grb2 is a small (215-amino-acid) adaptor protein that is widely expressed and involved in signal transduction/cell communication. The crystal structure of full-length Grb2 has previously been reported (PDB entry 1gri). The structure of the isolated SH3N domain is consistent with the full-length structure. The structure of the isolated SH3N domain was solved at a higher resolution (2.5 Å compared with 3.1 Å for the previously deposited structure) and made it possible to resolve some of the loops that were missing in the full-length structure. In addition, interactions between the carboxy-terminal region of the SH3N domain and the Sos1-binding sites were observed in the structure of the isolated domain. Analysis of these interactions provided new information about the ligand-binding properties of the SH3N domain of Grb2.

Indexed as

src Homology DomainsAmino Acid SequenceBinding SitesCrystallography, X-RayGRB2 Adaptor ProteinHumansModels, MolecularProtein BindingProtein ConformationGRB2 Adaptor ProteinGRB2 protein, humanadaptor proteinGrb2growth factor receptor-bound protein 2SH3 domain

Identifiers

PMID32510467
PMCPMC7278502
OpenAlexW3034137687

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.