Evidence map›Paper›PMID 32506392›Full record

ArticleMycopathologia2020

Phylogenetic Analysis of Clinically Relevant Fusarium Species in Iran.

Mohammad Javad Najafzadeh, Somayeh Dolatabadi, Sybren de Hoog, Mahmoud Karimizadeh Esfahani, Iman Haghani, Seyed Reza Aghili, Roshanak Daei Ghazvini, Ali Rezaei-Matehkolaei, Mahdi Abastabar, Abdullah M S Al-Hatmi

Abstract read
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In one paragraph

Article in Mycopathologia, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.7field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. VirulentFrontiers in plant science · 2024
    Article
  5. Current medical mycology · 2023
    Article
  6. Article
  7. Article
  8. Article
  9. Clinical Origin and Species Distribution ofJournal of fungi (Basel, Switzerland) · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 6 institutions in 4 countries.

Mohammad Javad NajafzadehDepartment of Parasitology and Mycology, Faculty of Medicine, Mashhad University of Medical Sciences, Mashhad, Iran.
Somayeh DolatabadiFaculty of Engineering, Sabzevar University of New Technology, Sabzevar, Iran.ORCID http://orcid.org/0000-0003-3862-8912
Sybren de HoogCenter of Expertise in Mycology of Radboud University Medical Center, Canisius Wilhelmina Hospital, Nijmegen, The Netherlands.
Mahmoud Karimizadeh EsfahaniDepartment of Parasitology and Mycology, Faculty of Medicine, Mashhad University of Medical Sciences, Mashhad, Iran.
Iman HaghaniInvasive Fungi Research Center (IFRC), School of Medicine, Mazandaran University of Medical Sciences, Sari, Iran.
Seyed Reza AghiliInvasive Fungi Research Center (IFRC), School of Medicine, Mazandaran University of Medical Sciences, Sari, Iran.
Roshanak Daei GhazviniDepartment of Medical Parasitology and Mycology, School of Public Health, Tehran University of Medical Sciences, Tehran, Iran.
Ali Rezaei-MatehkolaeiDepartment of Medical Mycology, School of Medicine, Ahvaz Jundishapur University of Medical Sciences, Ahvaz, Iran.
Mahdi AbastabarInvasive Fungi Research Center (IFRC), School of Medicine, Mazandaran University of Medical Sciences, Sari, Iran. mabastabar@gmail.com.
Abdullah M S Al-HatmiCenter of Expertise in Mycology of Radboud University Medical Center, Canisius Wilhelmina Hospital, Nijmegen, The Netherlands. abdullaalhatmi@gmail.com.
Mazandaran University of Medical Sciences · IRMashhad University of Medical Sciences · IRRadboud University Nijmegen · NLAhvaz Jundishapur University of Medical Sciences · IRSabzevar University of New Technology · IRTehran University of Medical Sciences · IR

Funding

National Institute for Medical Research Development IR.NIMAD.REC.971086
6 · The paper itself

Abstract

Fungi of the genus Fusarium are well known as major plant pathogens but also cause a broad spectrum of human infections. Sixty-three clinical isolates, collected during 2014-2017, were identified using a part of the TEF1 gene as barcoding marker. Fusarium fujikuroi species complex (FFSC, n = 41, 65%) showed to be the dominant etiological agent, followed by F. solani species complex (FSSC, n = 14, 22%) and F. oxysporum species complex (FOSC, n = 7, 11%). There was one strain belonging to F. lateritium species complex (FLSC, n = 1, 1.5%). For final identification, a phylogenetic tree was constructed including the type strains of each species complex. Most cases of fusariosis were due to nail infection (n = 38, 60.3%), followed by keratitis (n = 22, 34%). Fusarium infections are difficult to be treated due to their intrinsic resistance to different azoles; however, accurate and fast identification of etiological agents may enhance management of the infection. We present the first phylogenetic study on clinical Fusarium spp. from Iran.

Indexed as

Consensus SequenceDNA, FungalFusariosisFusariumHumansIranKeratitisLikelihood FunctionsOnychomycosisPhylogenyDNA, FungalFusarium fujikuroiKeratitisPhylogeny

Identifiers

PMID32506392
OpenAlexW3033928263

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.