Evidence map›Paper›PMID 32505352›Full record

ArticleBiochemical and biophysical research communications2020

Phosphorylation of mitochondrial transcription factor B2 controls mitochondrial DNA binding and transcription.

Alicia M Bostwick, Gonzalo E Moya, Mackenna L Senti, Urmimala Basu, Jiayu Shen, Smita S Patel, Kristin E Dittenhafer-Reed

Open access · greenAbstract read
In one paragraph

Article in Biochemical and biophysical research communications, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.3field-weighted citation impact, top 43% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Alicia M BostwickHope College, Department of Chemistry, 35 E. 12th Street, Holland, MI, 49423, United States.
Gonzalo E MoyaHope College, Department of Chemistry, 35 E. 12th Street, Holland, MI, 49423, United States.
Mackenna L SentiHope College, Department of Chemistry, 35 E. 12th Street, Holland, MI, 49423, United States.
Urmimala BasuRutgers University, Department of Biochemistry and Molecular Biology, Robert Wood Johnson Medical School, 683 Hoes Lane, Piscataway, NJ, 08854, United States.
Jiayu ShenRutgers University, Department of Biochemistry and Molecular Biology, Robert Wood Johnson Medical School, 683 Hoes Lane, Piscataway, NJ, 08854, United States.
Smita S PatelRutgers University, Department of Biochemistry and Molecular Biology, Robert Wood Johnson Medical School, 683 Hoes Lane, Piscataway, NJ, 08854, United States.
Kristin E Dittenhafer-ReedHope College, Department of Chemistry, 35 E. 12th Street, Holland, MI, 49423, United States. Electronic address: dittenhaferreed@hope.edu.
Hope College · USRutgers, The State University of New Jersey · US

Funding

Mechanistic studies of nucleic acid enzymes involved in DNA replication, transcription, and innate immunity.R35GM118086 · NIGMS · RUTGERS BIOMEDICAL AND HEALTH SCIENCES · PI SMITA S PATEL · 2016 to 2026
$8.9M
NIGMS NIH HHS R35 GM118086
6 · The paper itself

Abstract

Mammalian cells contain genetic information in two compartments, the nucleus and the mitochondria. Mitochondrial gene expression must be coordinated with nuclear gene expression to respond to cellular energetic needs. To gain insight into the coordination between the nucleus and mitochondria, there is a need to understand the regulation of transcription of mitochondrial DNA (mtDNA). Reversible protein post-translational modifications of the mtDNA transcriptional machinery may be one way to control mtDNA transcription. Here we focus on a member of the mtDNA transcription initiation complex, mitochondrial transcription factor B2 (TFB2M). TFB2M melts mtDNA at the promoter to allow the RNA polymerase (POLRMT) to access the DNA template and initiate transcription. Three phosphorylation sites have been previously identified on TFB2M by mass spectrometry: threonine 184, serine 197, and threonine 313. Phosphomimetics were established at these positions. Proteins were purified and analyzed for their ability to bind mtDNA and initiate transcription in vitro. Our results indicate phosphorylation at threonine 184 and threonine 313 impairs promoter binding and prevents transcription. These findings provide a potential regulatory mechanism of mtDNA transcription and help clarify the importance of protein post-translational modifications in mitochondrial function.

Indexed as

Base SequenceBinding SitesDNA-Directed RNA PolymerasesDNA, MitochondrialHumansIn Vitro TechniquesKineticsMethyltransferasesMitochondriaMitochondrial ProteinsModels, MolecularMolecular MimicryPhosphorylationPromoter Regions, GeneticProtein Interaction Domains and MotifsProtein Processing, Post-TranslationalDNA-Directed RNA PolymerasesDNA, MitochondrialMethyltransferasesMitochondrial ProteinsPOLRMT protein, humanTFB2M protein, humanTranscription FactorsMitochondrial DNAMitochondrial transcription factor B2 (TFB2M)PhosphorylationTranscription regulation

Identifiers

PMID32505352
PMCPMC9161741
OpenAlexW3034099930

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.