Evidence map›Paper›PMID 32504128›Full record

ReviewApplied microbiology and biotechnology2020

Flavin-dependent N-hydroxylating enzymes: distribution and application.

Carolin Mügge, Thomas Heine, Alvaro Gomez Baraibar, Willem J H van Berkel, Caroline E Paul, Dirk Tischler

Open access · hybridAbstract readReview
In one paragraph

Review in Applied microbiology and biotechnology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
5.6field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 56 citations in OpenAlex.

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  9. Elucidation of Chalkophomycin Biosynthesis RevealsJournal of the American Chemical Society · 2024
    Article
  10. Elucidation of chalkophomycin biosynthesis revealsbioRxiv : the preprint server for biology · 2024
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 5 institutions in 2 countries.

Carolin MüggeMicrobial Biotechnology, Faculty of Biology and Biotechnology, Ruhr-Universität Bochum, Universitätsstr. 150, 44780, Bochum, Germany.ORCID https://orcid.org/0000-0002-8065-173X
Thomas HeineEnvironmental Microbiology, Faculty of Chemistry and Physics, TU Bergakademie Freiberg, Leipziger Str. 29, 09599, Freiberg, Germany.ORCID https://orcid.org/0000-0002-7109-2788
Alvaro Gomez BaraibarMicrobial Biotechnology, Faculty of Biology and Biotechnology, Ruhr-Universität Bochum, Universitätsstr. 150, 44780, Bochum, Germany.ORCID https://orcid.org/0000-0001-7191-7316
Willem J H van BerkelLaboratory of Food Chemistry, Wageningen University & Research, Bornse Weilanden 9, 6708 WG, Wageningen, The Netherlands.ORCID https://orcid.org/0000-0002-6551-2782
Caroline E PaulBiocatalysis, Department of Biotechnology, Delft University of Technology, Van der Maasweg 9, HZ 2629, Delft, The Netherlands.ORCID https://orcid.org/0000-0002-7889-9920
Dirk TischlerMicrobial Biotechnology, Faculty of Biology and Biotechnology, Ruhr-Universität Bochum, Universitätsstr. 150, 44780, Bochum, Germany. dirk.tischler@rub.de.ORCID https://orcid.org/0000-0002-6288-2403
Ruhr University Bochum · DEDelft University of Technology · NLRoth and Rau (Germany) · DETU Bergakademie Freiberg · DEWageningen University & Research · NL

Funding

Bundesministerium für Bildung und Forschung 033R147Ministerium für Innovation, Wissenschaft und Forschung des Landes Nordrhein-Westfalen PtJ-TRI/1411ng006
6 · The paper itself

Abstract

Amino groups derived from naturally abundant amino acids or (di)amines can be used as "shuttles" in nature for oxygen transfer to provide intermediates or products comprising N-O functional groups such as N-hydroxy, oxazine, isoxazolidine, nitro, nitrone, oxime, C-, S-, or N-nitroso, and azoxy units. To this end, molecular oxygen is activated by flavin, heme, or metal cofactor-containing enzymes and transferred to initially obtain N-hydroxy compounds, which can be further functionalized. In this review, we focus on flavin-dependent N-hydroxylating enzymes, which play a major role in the production of secondary metabolites, such as siderophores or antimicrobial agents. Flavoprotein monooxygenases of higher organisms (among others, in humans) can interact with nitrogen-bearing secondary metabolites or are relevant with respect to detoxification metabolism and are thus of importance to understand potential medical applications. Many enzymes that catalyze N-hydroxylation reactions have specific substrate scopes and others are rather relaxed. The subsequent conversion towards various N-O or N-N comprising molecules is also described. Overall, flavin-dependent N-hydroxylating enzymes can accept amines, diamines, amino acids, amino sugars, and amino aromatic compounds and thus provide access to versatile families of compounds containing the N-O motif. Natural roles as well as synthetic applications are highlighted. Key points • N-O and N-N comprising natural and (semi)synthetic products are highlighted. • Flavin-based NMOs with respect to mechanism, structure, and phylogeny are reviewed. • Applications in natural product formation and synthetic approaches are provided. Graphical abstract .

Indexed as

BiocatalysisSecondary MetabolismBacteriaBiological ProductsFlavinsFlavoproteinsHumansHydroxylationKineticsMixed Function OxygenasesOxygenSiderophoresBiological ProductsFlavinsFlavoproteinsMixed Function OxygenasesOxygenSiderophoresBioactive compoundsBiocatalysisBiotransformationFlavoproteinsMonooxygenasesN-HydroxylasesPhylogeneticsSiderophores

Identifiers

PMID32504128
PMCPMC7347517
OpenAlexW3033064550

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.