Evidence map›Paper›PMID 32504085›Full record

ArticleHuman molecular genetics2020

Biallelic variants in the RNA exosome gene EXOSC5 are associated with developmental delays, short stature, cerebellar hypoplasia and motor weakness.

Anne Slavotinek, Doriana Misceo, Stephanie Htun, Linda Mathisen, Eirik Frengen, Michelle Foreman, Jennifer E Hurtig, Liz Enyenihi, Maria C Sterrett, Sara W Leung and 13 more

Abstract read
In one paragraph

Article in Human molecular genetics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed.

  1. Review
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Built differently or defective: can RNA exosomopathies cause ribosome heterogeneity?Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2025
    Review
  10. Article
  11. Article
  12. Article
  13. A Biallelic Variant of the RNA Exosome GenemedRxiv : the preprint server for health sciences · 2023
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Review
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

23 authors.

Anne SlavotinekDepartment of Pediatrics, University of California, San Francisco, CA 94143, USA.
Doriana MisceoDepartment of Medical Genetics, Oslo University Hospital and University of Oslo, Oslo 0450, Norway.
Stephanie HtunDepartment of Pediatrics, University of California, San Francisco, CA 94143, USA.
Linda MathisenDepartment of Medical Genetics, Oslo University Hospital and University of Oslo, Oslo 0450, Norway.
Eirik FrengenDepartment of Medical Genetics, Oslo University Hospital and University of Oslo, Oslo 0450, Norway.
Michelle ForemanDepartment of Microbiology and Molecular Genetics, University of Texas Health Science Center-Houston, Houston, TX 77030, USA.
Jennifer E HurtigDepartment of Microbiology and Molecular Genetics, University of Texas Health Science Center-Houston, Houston, TX 77030, USA.
Liz EnyenihiDepartment of Biology, Emory University, Atlanta, GA 30322, USA.
Maria C SterrettDepartment of Biology, Emory University, Atlanta, GA 30322, USA.
Sara W LeungDepartment of Biology, Emory University, Atlanta, GA 30322, USA.
Dina Schneidman-DuhovnySchool of Computer Science and Engineering and the Institute of Life Sciences, The Hebrew University of Jerusalem, Jerusalem 91904, Israel.
Juvianee Estrada-VerasDepartment of Pediatrics-Medical Genetics and Metabolism, Uniformed Services University/Walter Reed NMMC Bethesda, MD 20889, USA.
Jacque L DuncanDepartment of Ophthalmology, University of California, San Francisco, CA 94143, USA.
Charlotte A HaaxmaDepartment of Pediatric Neurology, Amalia Children's Hospital and Donders Institute for Brain, Cognition and Behaviour, Radboud University Medical Center, Nijmegen 6500 HB, The Netherlands.
Erik-Jan KamsteegDepartment of Human Genetics, Radboud University Medical Center, Nijmegen 6500 HB, The Netherlands.
Vivian XiaDepartment of Pediatrics, University of California, San Francisco, CA 94143, USA.
Daniah BelefordDepartment of Pediatrics, University of California, San Francisco, CA 94143, USA.
Yue SiGeneDx Inc., MD 20877, USA.
Ganka DouglasGeneDx Inc., MD 20877, USA.
Hans Einar TreideneDepartment of Radiology and Nuclear Medicine, Oslo University Hospital, Oslo 0450, Norway.
Ambro van HoofDepartment of Microbiology and Molecular Genetics, University of Texas Health Science Center-Houston, Houston, TX 77030, USA.
Milo B FaskenDepartment of Biology, Emory University, Atlanta, GA 30322, USA.
Anita H CorbettDepartment of Biology, Emory University, Atlanta, GA 30322, USA.

Funding

Sharing Aggregate Genomics Research Findings with Diverse Participants: A Pilot Study of an Innovative Design StrategyU01HG009599 · NHGRI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI KOENIG, BARBARA A., KWOK, PUI-YAN · 2017 to 2021
$16.3M
Training Program in Biochemistry, Cell and Molecular BiologyT32GM008367 · NIGMS · EMORY UNIVERSITY · PI BOISE, LAWRENCE H., CORBETT, ANITA H. · 1990 to 2019
$5.6M
Insight Into The RNA Processing And Decay Pathways Critical For Proper Neuronal Development And Function Through Focus On Mutations That Cause Pontocerebellar HypoplasiaR01GM130147 · NIGMS · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI CORBETT, ANITA H., VAN HOOF, AMBRO · 2018 to 2021
$1.4M
A Budding Yeast Model for Human Disease-Mutations in the RNA ExosomeF31GM134649 · NIGMS · EMORY UNIVERSITY · PI STERRETT, MARIA CARSON · 2020 to 2022
$138k
NHGRI NIH HHS U01 HG009599NIGMS NIH HHS F31 GM134649NIGMS NIH HHS R01 GM130147NIGMS NIH HHS T32 GM008367
6 · The paper itself

Abstract

The RNA exosome is an essential ribonuclease complex required for processing and/or degradation of both coding and non-coding RNAs. We identified five patients with biallelic variants in EXOSC5, which encodes a structural subunit of the RNA exosome. The clinical features of these patients include failure to thrive, short stature, feeding difficulties, developmental delays that affect motor skills, hypotonia and esotropia. Brain MRI revealed cerebellar hypoplasia and ventriculomegaly. While we ascertained five patients, three patients with distinct variants of EXOSC5 were studied in detail. The first patient had a deletion involving exons 5-6 of EXOSC5 and a missense variant, p.Thr114Ile, that were inherited in trans, the second patient was homozygous for p.Leu206His and the third patient had paternal isodisomy for chromosome 19 and was homozygous for p.Met148Thr. The additional two patients ascertained are siblings who had an early frameshift mutation in EXOSC5 and the p.Thr114Ile missense variant that were inherited in trans. We employed three complementary approaches to explore the requirement for EXOSC5 in brain development and assess consequences of pathogenic EXOSC5 variants. Loss of function for exosc5 in zebrafish results in shortened and curved tails/bodies, reduced eye/head size and edema. We modeled pathogenic EXOSC5 variants in both budding yeast and mammalian cells. Some of these variants cause defects in RNA exosome function as well as altered interactions with other RNA exosome subunits. These findings expand the number of genes encoding RNA exosome subunits linked to human disease while also suggesting that disease mechanism varies depending on the specific pathogenic variant.

Indexed as

AnimalsAntigens, NeoplasmCerebellumDevelopmental DisabilitiesDwarfismExosome Multienzyme Ribonuclease ComplexFrameshift MutationHomozygoteHumansMutation, MissenseNervous System MalformationsPedigreeRNA-Binding ProteinsZebrafishAntigens, NeoplasmEXOSC5 protein, humanExosome Multienzyme Ribonuclease ComplexRNA-Binding Proteins

Identifiers

PMID32504085
PMCPMC7399534

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.