Evidence map›Paper›PMID 32500372›Full record

ArticleVirus genes2020

Retrospective analysis of HIV-1 drug resistance mutations in Suzhou, China from 2009 to 2014.

Yanhui Song, Jingping Hu, Jun He, Chunsheng Dong, Ying Yuan, Yuan Li, Ronghua Li, Xuerong Ya

Abstract read
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In one paragraph

Article in Virus genes, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.0field-weighted citation impact, top 61% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 2 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Yanhui SongCenter of Clinical Laboratory, the First Affiliated Hospital of Soochow University, Soochow University, Clinic Bldg, Rm 201, 899 Pinghai Road, Suzhou, 215031, China. syh430071@163.com.ORCID http://orcid.org/0000-0002-1975-1483
Jingping HuThe Institutes of Biology and Medical Sciences, Soochow University, Suzhou, China.
Jun HeCenter of Clinical Laboratory, the First Affiliated Hospital of Soochow University, Soochow University, Clinic Bldg, Rm 201, 899 Pinghai Road, Suzhou, 215031, China.
Chunsheng DongThe Institutes of Biology and Medical Sciences, Soochow University, Suzhou, China.
Ying YuanCenter of Clinical Laboratory, the First Affiliated Hospital of Soochow University, Soochow University, Clinic Bldg, Rm 201, 899 Pinghai Road, Suzhou, 215031, China.
Yuan LiCenter of Clinical Laboratory, the First Affiliated Hospital of Soochow University, Soochow University, Clinic Bldg, Rm 201, 899 Pinghai Road, Suzhou, 215031, China.
Ronghua LiCenter of Clinical Laboratory, the First Affiliated Hospital of Soochow University, Soochow University, Clinic Bldg, Rm 201, 899 Pinghai Road, Suzhou, 215031, China.
Xuerong YaSuzhou Center for Disease Control and Prevention, Suzhou, China.
Soochow University · CN

Funding

National Natural Science Foundation of China 31870867National Natural Science Foundation of China 81802083State Key Laboratory of Veterinary Biotechnology Foundation SKLVBF201916the Jiangsu Province Medical Innovation Team CXTDB2017009the Jiangsu Province's Key Discipline of Prenatal Diagnosis FXK201746
6 · The paper itself

Abstract

In this study, we investigated drug resistance levels in human immunodeficiency virus (HIV)-1-infected patients in Suzhou by retrospectively analyzing this property and the characteristics of circulating HIV-1 strains collected from 2009 to 2014. A total of 261 HIV-1-positive plasma samples, confirmed by the Suzhou CDC, were collected and evaluated to detect HIV-1 drug resistance genotypes using an in-house method. The pol gene fragment was amplified, and its nucleic acid sequence was determined by Sanger sequencing. Drug resistance mutations were then analyzed using the Stanford University HIV resistance database ( https://hivdb.stanford.edu ). A total of 216 pol gene fragments were amplified and sequenced with 16.7% (36/216) of sequences revealing these mutations. The drug resistance rates of protease, nucleoside reverse transcriptase, and non-nucleoside reverse transcriptase inhibitors (NNRTIs) were 4/36 (11.1%), 2/36 (5.6%), and 30/36 (83.3%), respectively. Five surveillance drug resistance mutations were found in 36 sequences, of which, three were found among specimens of men who have sex with men. Potential low-level resistance accounted for 33% of amino acid mutations associated with NNRTIs. Two of the mutations, M230L and L100I, which confer a high level of resistance efavirenz (EFV) and nevirapine (NVP) used as NNRTIs for first-line antiretroviral therapy (ART), were detected in this study. Therefore, when HIV-1 patients in Suzhou are administered fist-line ART, much attention should be paid to the status of these mutations that cause resistance to EVP, EFV, and NVP.

Indexed as

HIV-1HIV InfectionsAdultAnti-HIV AgentsChinaDrug Resistance, ViralFemaleHumansMaleMiddle AgedMutationRetrospective StudiesYoung AdultAnti-HIV AgentsAntiretroviral therapyChinaDrug resistance mutationEpidemiologyHIV-1

Identifiers

PMID32500372
OpenAlexW3033901664

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.