ArticleScientific reports2020
De novo RNA sequencing analysis of Aeluropus littoralis halophyte plant under salinity stress.
Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.
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Who cites it
7 citing papers in PubMed, 29 citations in OpenAlex.
- Aeluropus lagopoides: an important halophyte with key physiological and molecular mechanisms for salinity tolerance and a unique genetic resource for developing climate resilient crops.Journal of plant research · 2025Review
- Genome-wide analysis of the laccase (LAC) gene family inFrontiers in plant science · 2023Article
- Salt Stress Tolerance inPlants (Basel, Switzerland) · 2022Article
- Spatial Genomic Resource Reveals Molecular Insights into Key Bioactive-Metabolite Biosynthesis in EndangeredInternational journal of molecular sciences · 2022Article
- Comparative Analysis of Italian Lettuce (Genes · 2022Article
- Article
- Plastid phylogenomics and morphological character evolution of Chloridoideae (Poaceae).Frontiers in plant science · 2022Article
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Authors and funding
5 authors at 3 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
The study of salt tolerance mechanisms in halophyte plants can provide valuable information for crop breeding and plant engineering programs. The aim of the present study was to investigate whole transcriptome analysis of Aeluropus littoralis in response to salinity stress (200 and 400 mM NaCl) by de novo RNA-sequencing. To assemble the transcriptome, Trinity v2.4.0 and Bridger tools, were comparatively used with two k-mer sizes (25 and 32 bp). The de novo assembled transcriptome by Bridger (k-mer 32) was chosen as final assembly for subsequent analysis. In general, 103290 transcripts were obtained. The differential expression analysis (log
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