Evidence map›Paper›PMID 32499524›Full record

ArticleNature communications2020

The Mi-2 nucleosome remodeler and the Rpd3 histone deacetylase are involved in piRNA-guided heterochromatin formation.

Bruno Mugat, Simon Nicot, Carolina Varela-Chavez, Christophe Jourdan, Kaoru Sato, Eugenia Basyuk, François Juge, Mikiko C Siomi, Alain Pélisson, Séverine Chambeyron

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
6.7field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 48 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Article
  5. H3K14ac facilitates the reinstallation of constitutive heterochromatin inProceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  6. Article
  7. Article
  8. The Molecular Impacts of Retrotransposons in Development and Diseases.International journal of molecular sciences · 2023
    Review
  9. Article
  10. Regulation of SUMOylation on RNA metabolism in cancers.Frontiers in molecular biosciences · 2023
    Review
  11. Review
  12. Review
  13. Article
  14. Review
  15. Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 2 countries.

Bruno MugatInstitute of Human Genetics, UMR9002, CNRS and Univ. Montpellier, Montpellier, France.
Simon NicotInstitute of Human Genetics, UMR9002, CNRS and Univ. Montpellier, Montpellier, France.
Carolina Varela-ChavezInstitute of Human Genetics, UMR9002, CNRS and Univ. Montpellier, Montpellier, France.
Christophe JourdanInstitute of Human Genetics, UMR9002, CNRS and Univ. Montpellier, Montpellier, France.
Kaoru SatoDepartment of Biological Sciences, Graduate School of Science, The University of Tokyo, Tokyo, Japan.
Eugenia BasyukInstitute of Human Genetics, UMR9002, CNRS and Univ. Montpellier, Montpellier, France.
François JugeInstitut de Génétique Moléculaire de Montpellier, University of Montpellier, CNRS, Montpellier, France.ORCID http://orcid.org/0000-0001-5015-2019
Mikiko C SiomiDepartment of Biological Sciences, Graduate School of Science, The University of Tokyo, Tokyo, Japan.
Alain PélissonInstitute of Human Genetics, UMR9002, CNRS and Univ. Montpellier, Montpellier, France.
Séverine ChambeyronInstitute of Human Genetics, UMR9002, CNRS and Univ. Montpellier, Montpellier, France. severine.chambeyron@igh.cnrs.fr.ORCID http://orcid.org/0000-0003-2775-6556
Centre National de la Recherche Scientifique · FRThe University of Tokyo · JP

Funding

DROSOPHILA GENOMICS RESOURCE CENTERP40OD010949 · OD · TRUSTEES OF INDIANA UNIVERSITY · PI Andrew Zelhof · 2012 to 2026
$9.4M
NIH HHS P40 OD010949
6 · The paper itself

Abstract

In eukaryotes, trimethylation of lysine 9 on histone H3 (H3K9) is associated with transcriptional silencing of transposable elements (TEs). In drosophila ovaries, this heterochromatic repressive mark is thought to be deposited by SetDB1 on TE genomic loci after the initial recognition of nascent transcripts by PIWI-interacting RNAs (piRNAs) loaded on the Piwi protein. Here, we show that the nucleosome remodeler Mi-2, in complex with its partner MEP-1, forms a subunit that is transiently associated, in a MEP-1 C-terminus-dependent manner, with known Piwi interactors, including a recently reported SUMO ligase, Su(var)2-10. Together with the histone deacetylase Rpd3, this module is involved in the piRNA-dependent TE silencing, correlated with H3K9 deacetylation and trimethylation. Therefore, drosophila piRNA-mediated transcriptional silencing involves three epigenetic effectors, a remodeler, Mi-2, an eraser, Rpd3 and a writer, SetDB1, in addition to the Su(var)2-10 SUMO ligase.

Indexed as

Adenosine TriphosphatasesAnimalsArgonaute ProteinsAutoantigensDrosophila melanogasterDrosophila ProteinsEpigenesis, GeneticFemaleGene Expression RegulationGene SilencingHeterochromatinHistone Deacetylase 1HistonesNucleosomesOvaryProtein Inhibitors of Activated STATAdenosine TriphosphatasesArgonaute ProteinsAutoantigensDrosophila ProteinsHDAC1 protein, DrosophilaHeterochromatinHistone Deacetylase 1HistonesMi-2 protein, DrosophilaNucleosomesProtein Inhibitors of Activated STATRNA, Small InterferingSu(var)2-10 protein, Drosophila

Identifiers

PMID32499524
PMCPMC7272611
OpenAlexW3034127966

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.