Evidence map›Paper›PMID 32497955›Full record

ReviewCurrent opinion in genetics & development2020

The self-stirred genome: large-scale chromatin dynamics, its biophysical origins and implications.

Alexandra Zidovska

Abstract readReview
In one paragraph

Review in Current opinion in genetics & development, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed.

  1. Article
  2. Active processes shape and move the genome and nucleoplasm.Current opinion in genetics & development · 2026
    Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Individual transcription factors modulate both the micromovement of chromatin and its long-range structure.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  9. Article
  10. How it feels in a cell.Trends in cell biology · 2023
    Review
  11. Nucleus Mechanosensing in Cardiomyocytes.International journal of molecular sciences · 2023
    Review
  12. The Impact of Space and Time on the Functional Output of the Genome.Cold Spring Harbor perspectives in biology · 2022
    Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

1 author.

Alexandra ZidovskaCenter for Soft Matter Research, Department of Physics, New York University, New York, NY, 10003, USA. Electronic address: alexandra.zidovska@nyu.edu.

Funding

Mechanism and Function of Chromatin Positional Dynamics in InterphaseR00GM104152 · NIGMS · NEW YORK UNIVERSITY · PI ZIDOVSKA, ALEXANDRA · 2014 to 2016
$747k
NIGMS NIH HHS R00 GM104152
6 · The paper itself

Abstract

The organization and dynamics of human genome govern all cellular processes - directly impacting the central dogma of biology - yet are poorly understood, especially at large length scales. Chromatin, the functional form of DNA in cells, undergoes frequent local remodeling and rearrangements to accommodate processes such as transcription, replication and DNA repair. How these local activities contribute to nucleus-wide coherent chromatin motion, where micron-scale regions of chromatin move together over several seconds, remains unclear. Activity of nuclear enzymes was found to drive the coherent chromatin dynamics, however, its biological nature and physical mechanism remain to be revealed. The coherent dynamics leads to a perpetual stirring of the genome, leading to collective gene dynamics over microns and seconds, thus likely contributing to local and global gene-expression patterns. Hence, a possible biological role of chromatin coherence may involve gene regulation.

Indexed as

ChromatinChromatin Assembly and DisassemblyDNADNA RepairGene Expression RegulationGenome, HumanHumansInterphaseChromatinDNA

Identifiers

PMID32497955
PMCPMC8164847

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.