Evidence map›Paper›PMID 32497144›Full record

ArticlePloS one2020

Novel markers for high-throughput protoplast-based analyses of phytohormone signaling.

Silke Lehmann, Ana Dominguez-Ferreras, Wei-Jie Huang, Katherine Denby, Vardis Ntoukakis, Patrick Schäfer

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
2.8field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 17 citations in OpenAlex.

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  11. Review
  12. Hormones as go-betweens in plant microbiome assembly.The Plant journal : for cell and molecular biology · 2021
    Review
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Silke LehmannSchool of Life Sciences, The University of Warwick, Coventry, England, United Kingdom.ORCID 0000-0001-6838-7422
Ana Dominguez-FerrerasSchool of Life Sciences, The University of Warwick, Coventry, England, United Kingdom.
Wei-Jie HuangSchool of Life Sciences, The University of Warwick, Coventry, England, United Kingdom.ORCID 0000-0001-5208-6713
Katherine DenbySchool of Life Sciences, The University of Warwick, Coventry, England, United Kingdom.
Vardis NtoukakisSchool of Life Sciences, The University of Warwick, Coventry, England, United Kingdom.
Patrick SchäferSchool of Life Sciences, The University of Warwick, Coventry, England, United Kingdom.
University of Warwick · GB

Funding

Biotechnology and Biological Sciences Research Council BB/M017982/1
6 · The paper itself

Abstract

Phytohormones mediate most diverse processes in plants, ranging from organ development to immune responses. Receptor protein complexes perceive changes in intracellular phytohormone levels and trigger a signaling cascade to effectuate downstream responses. The in planta analysis of elements involved in phytohormone signaling can be achieved through transient expression in mesophyll protoplasts, which are a fast and versatile alternative to generating plant lines that stably express a transgene. While promoter-reporter constructs have been used successfully to identify internal or external factors that change phytohormone signaling, the range of available marker constructs does not meet the potential of the protoplast technique for large scale approaches. The aim of our study was to provide novel markers for phytohormone signaling in the Arabidopsis mesophyll protoplast system. We validated 18 promoter::luciferase constructs towards their phytohormone responsiveness and specificity and suggest an experimental setup for high-throughput analyses. We recommend novel markers for the analysis of auxin, abscisic acid, cytokinin, salicylic acid and jasmonic acid responses that will facilitate future screens for biological elements and environmental stimuli affecting phytohormone signaling.

Indexed as

Signal TransductionArabidopsisBiomarkersPlant Growth RegulatorsProtoplastsBiomarkersPlant Growth Regulators

Identifiers

PMID32497144
PMCPMC7272087
OpenAlexW3033701072

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.