ArticlePloS one2020
Comparative metagenomics reveals the microbial diversity and metabolic potentials in the sediments and surrounding seawaters of Qinhuangdao mariculture area.
Article in PloS one, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.
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Who cites it
18 citing papers in PubMed.
- High-throughput 16S rRNA sequencing reveals gut dysbiosis and linked hepatic toxicity in triflumezopyrim treated juvenile freshwater fish Labeo rohita.World journal of microbiology & biotechnology · 2026Article
- Temporal-Spatial Variations in Microbial Diversity and Community Composition in Surface Waters and Bottom Sediments of the Bohai Sea, China.Microorganisms · 2025Article
- Shift in the metabolic profile of sediment microbial communities during seagrass decline.Environmental microbiome · 2025Article
- Microbial Detoxification of Sediments Underpins Persistence ofInternational journal of molecular sciences · 2024Article
- Novel insights into the rhizosphere and seawater microbiome of Zostera marina in diverse mariculture zones.Microbiome · 2024Article
- Article
- A review: Marine aquaculture impacts marine microbial communities.AIMS microbiology · 2024Review
- The impact of antibiotic exposure on antibiotic resistance gene dynamics in the gut microbiota of inflammatory bowel disease patients.Frontiers in microbiology · 2024Article
- Studies on the Composition and Diversity of SeagrassPlants (Basel, Switzerland) · 2023Article
- Comparison of long- and short-read metagenomic assembly for low-abundance species and resistance genes.Briefings in bioinformatics · 2023Article
- Natural Variations in the Benthic Environment and Bacterial Communities of Coastal Sediments around Aquaculture Farms in South Korea.Indian journal of microbiology · 2023Article
- Metagenomes from Coastal Sediments of Kuwait: Insights into the Microbiome, Metabolic Functions and Resistome.Microorganisms · 2023Article
- An Integrative, Multiparametric Approach for the Comprehensive Assessment of Microbial Quality and Pollution in Aquaculture Systems.Microbial ecology · 2022Article
- KOMB: K-core based de novo characterization of copy number variation in microbiomes.Computational and structural biotechnology journal · 2022Article
- Core of the saliva microbiome: an analysis of the MG-RAST data.BMC oral health · 2021Article
- Article
- Assessment of Biological Contribution to Natural Recovery of Anthropized Freshwater Sediments From Argentina: Autochthonous Microbiome Structure and Functional Prediction.Frontiers in microbiology · 2021Article
- Metagenomic Approaches to Analyze Antimicrobial Resistance: An Overview.Frontiers in genetics · 2020Review
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Authors and funding
5 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Qinhuangdao coastal area is an important mariculture area in North China. Microbial communities play an important role in driving biogeochemical cycle and energy flow. It is necessary to identify the microbial communities and their functions in the coastal mariculture area of Qinhuangdao. In this study, the microbial community compositions and their metabolic potentials in the sediments and their surrounding seawaters of Qinhuangdao mariculture area were uncovered by the 16S rRNA gene amplicon sequencing and metagenomic shotgun sequencing approaches. The results of amplicon sequencing showed that Gammaproteobacteria and Alphaproteobacteria were predominant classes. Our datasets showed a clear shift in microbial taxonomic groups and the metabolic pathways in the sediments and surrounding seawaters. Metagenomic analysis showed that purine metabolism, ABC transporters, and pyrimidine metabolism were the most abundant pathways. Genes related to two-component system, TCA cycle and nitrogen metabolism exhibited higher abundance in sediments compared with those in seawaters. The presence of cadmium-resistant genes and ABC transporters suggested the ability of microorganisms to resist the toxicity of cadmium. In summary, this study provides comprehensive and significant differential signatures in the microbial community and metabolic pathways in Qinhuangdao mariculture area, and can develop effective microbial indicators to monitor mariculture area in the future.
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