Evidence map›Paper›PMID 32494630›Full record

ArticleScience advances2020

Assessing heterogeneity among single embryos and single blastomeres using open microfluidic design.

Elisabet Rosàs-Canyelles, Andrew J Modzelewski, Alisha Geldert, Lin He, Amy E Herr

Abstract read
In one paragraph

Article in Science advances, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Single-Cell Nucleus Extraction with Cellular Indexing.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2025
    Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. The Intriguing Landscape of Single-Cell Protein Analysis.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2022
    Review
  7. The Future of IVF: The New Normal in Human Reproduction.Reproductive sciences (Thousand Oaks, Calif.) · 2022
    Article
  8. Microfluidic systems for modeling human development.Development (Cambridge, England) · 2022
    Article
  9. Cellular fluidics.Nature · 2021
    Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Elisabet Rosàs-CanyellesDepartment of Bioengineering, University of California Berkeley, Berkeley, CA 94720, USA.ORCID 0000-0002-7640-5747
Andrew J ModzelewskiDivision of Cellular and Developmental Biology, Department of Molecular & Cell Biology, University of California, Berkeley, Berkeley, CA 94720, USA.
Alisha GeldertDepartment of Bioengineering, University of California Berkeley, Berkeley, CA 94720, USA.ORCID 0000-0002-8134-2998
Lin HeDivision of Cellular and Developmental Biology, Department of Molecular & Cell Biology, University of California, Berkeley, Berkeley, CA 94720, USA.ORCID 0000-0001-5928-1263
Amy E HerrDepartment of Bioengineering, University of California Berkeley, Berkeley, CA 94720, USA.ORCID 0000-0002-6906-2985

Funding

UCSF/UCB Joint Graduate Group in BIoengineeringT32GM008155 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI DESAI, TEJAL A. · 1985 to 2020
$12.2M
miR-200 miRNAs repress tumor metastasis in lung adenocarcinomaR01CA139067 · NCI · UNIVERSITY OF CALIFORNIA BERKELEY · PI HE, LIN · 2009 to 2021
$3.3M
MULTIPLEXED ISOFORM QUANTIFICATION IN HER2-POSITIVE BREAST CANCERR01CA203018 · NCI · UNIVERSITY OF CALIFORNIA BERKELEY · PI HERR, AMY ELIZABETH · 2016 to 2024
$2.8M
Characterize the role of miR-34/449 miRNAs in regulating motile ciliogenesisR01GM114414 · NIGMS · UNIVERSITY OF CALIFORNIA BERKELEY · PI HE, LIN · 2015 to 2018
$1.2M
The Role of Retrotransposon Activity in Mammalian Pre-Implantation DevelopmentR00HD096108 · NICHD · UNIVERSITY OF PENNSYLVANIA · PI MODZELEWSKI, ANDREW JOSEPH · 2022 to 2024
$744k
miR-200 miRNAs regulate motile ciliogenesis in respiratory epitheliaR21HD088885 · NICHD · UNIVERSITY OF CALIFORNIA BERKELEY · PI HE, LIN · 2017 to 2018
$432k
The Role of Retrotransposon Activity in Mammalian Pre-Implantation DevelopmentK99HD096108 · NICHD · UNIVERSITY OF CALIFORNIA BERKELEY · PI MODZELEWSKI, ANDREW JOSEPH · 2018 to 2020
$310k
Investigating the role of Retrotransposon muERV-L reactivation in TumorigenesisF32CA192636 · NCI · UNIVERSITY OF CALIFORNIA BERKELEY · PI MODZELEWSKI, ANDREW JOSEPH · 2015 to 2017
$168k
NCI NIH HHS F32 CA192636NCI NIH HHS R01 CA139067NCI NIH HHS R01 CA203018NICHD NIH HHS K99 HD096108NICHD NIH HHS R00 HD096108NICHD NIH HHS R21 HD088885NIGMS NIH HHS R01 GM114414NIGMS NIH HHS T32 GM008155
6 · The paper itself

Abstract

The process by which a zygote develops from a single cell into a multicellular organism is poorly understood. Advances are hindered by detection specificity and sensitivity limitations of single-cell protein tools and by challenges in integrating multimodal data. We introduce an open microfluidic tool expressly designed for same-cell phenotypic, protein, and mRNA profiling. We examine difficult-to-study-yet critically important-murine preimplantation embryo stages. In blastomeres dissociated from less well-studied two-cell embryos, we observe no significant GADD45a protein expression heterogeneity, apparent at the four-cell stage. In oocytes, we detect differences in full-length versus truncated DICER-1 mRNA and protein, which are insignificant by the two-cell stage. Single-embryo analyses reveal intraembryonic heterogeneity, differences between embryos of the same fertilization event and between donors, and reductions in the burden of animal sacrifice. Open microfluidic design integrates with existing workflows and opens new avenues for assessing the cellular-to-molecular heterogeneity inherent to preimplantation embryo development.

Identifiers

PMID32494630
PMCPMC7176412

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.