Evidence map›Paper›PMID 32494611›Full record

ArticleScience advances2020

Revealing in real-time a multistep assembly mechanism for SV40 virus-like particles.

Mariska G M van Rosmalen, Douwe Kamsma, Andreas S Biebricher, Chenglei Li, Adam Zlotnick, Wouter H Roos, Gijs J L Wuite

Abstract read
In one paragraph

Article in Science advances, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

  1. Review
  2. Measuring bridging forces in protein-DNA condensates.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  3. Article
  4. Article
  5. Optical Tweezers to Study Viruses.Sub-cellular biochemistry · 2024
    Review
  6. Review
  7. Article
  8. Sounding a New Era in Biomechanics with Acoustic Force Spectroscopy.Advances in experimental medicine and biology · 2023
    Article
  9. Article
  10. Review
  11. Article
  12. Review
  13. Physics of viral dynamics.Nature reviews. Physics · 2021
    Review
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Mariska G M van RosmalenNatuur- en Sterrenkunde and LaserLaB, Vrije Universiteit Amsterdam, Boelelaan 1081, 1081 HV Amsterdam, Netherlands.ORCID 0000-0002-3027-8180
Douwe KamsmaNatuur- en Sterrenkunde and LaserLaB, Vrije Universiteit Amsterdam, Boelelaan 1081, 1081 HV Amsterdam, Netherlands.ORCID 0000-0001-6990-6300
Andreas S BiebricherNatuur- en Sterrenkunde and LaserLaB, Vrije Universiteit Amsterdam, Boelelaan 1081, 1081 HV Amsterdam, Netherlands.
Chenglei LiDepartment of Molecular and Cellular Biochemistry, Indiana University, 212 S Hawthorne Dr., Bloomington, IN 47405, USA.ORCID 0000-0003-2789-967X
Adam ZlotnickDepartment of Molecular and Cellular Biochemistry, Indiana University, 212 S Hawthorne Dr., Bloomington, IN 47405, USA.ORCID 0000-0001-9945-6267
Wouter H RoosMoleculaire Biofysica, Zernike Instituut, Rijksuniversiteit Groningen, Nijenborgh 4, 9747 AG Groningen, Netherlands.ORCID 0000-0002-5104-0139
Gijs J L WuiteNatuur- en Sterrenkunde and LaserLaB, Vrije Universiteit Amsterdam, Boelelaan 1081, 1081 HV Amsterdam, Netherlands.ORCID 0000-0002-5706-043X

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Many viruses use their genome as template for self-assembly into an infectious particle. However, this reaction remains elusive because of the transient nature of intermediate structures. To elucidate this process, optical tweezers and acoustic force spectroscopy are used to follow viral assembly in real time. Using Simian virus 40 (SV40) virus-like particles as model system, we reveal a multistep assembly mechanism. Initially, binding of VP1 pentamers to DNA leads to a significantly decreased persistence length. Moreover, the pentamers seem able to stabilize DNA loops. Next, formation of interpentamer interactions results in intermediate structures with reduced contour length. These structures stabilize into objects that permanently decrease the contour length to a degree consistent with DNA compaction in wild-type SV40. These data indicate that a multistep mechanism leads to fully assembled cross-linked SV40 particles. SV40 is studied as drug delivery system. Our insights can help optimize packaging of therapeutic agents in these particles.

Identifiers

PMID32494611
PMCPMC7159915

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.