Evidence map›Paper›PMID 32492063›Full record

ArticlePloS one2020

Morphological and physiological characterization of filamentous Lentzea aerocolonigenes: Comparison of biopellets by microscopy and flow cytometry.

Kathrin Schrinner, Lukas Veiter, Stefan Schmideder, Philipp Doppler, Marcel Schrader, Nadine Münch, Kristin Althof, Arno Kwade, Heiko Briesen, Christoph Herwig and 1 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.8field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 24 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 2 countries.

Kathrin SchrinnerInstitute of Biochemical Engineering, Technische Universität Braunschweig, Braunschweig, Germany.
Lukas VeiterInstitute of Chemical, Environmental and Bioscience Engineering, Research Area Biochemical Engineering, Technische Universität Wien, Vienna, Austria.
Stefan SchmidederSchool of Life Sciences, Chair of Process Systems Engineering, Technische Universität München, Freising, Germany.
Philipp DopplerInstitute of Chemical, Environmental and Bioscience Engineering, Research Area Biochemical Engineering, Technische Universität Wien, Vienna, Austria.
Marcel SchraderTechnische Universität Braunschweig, Center of Pharmaceutical Engineering, Braunschweig, Germany.
Nadine MünchSchool of Life Sciences, Chair of Process Systems Engineering, Technische Universität München, Freising, Germany.
Kristin AlthofInstitute of Biochemical Engineering, Technische Universität Braunschweig, Braunschweig, Germany.
Arno KwadeTechnische Universität Braunschweig, Center of Pharmaceutical Engineering, Braunschweig, Germany.
Heiko BriesenSchool of Life Sciences, Chair of Process Systems Engineering, Technische Universität München, Freising, Germany.
Christoph HerwigInstitute of Chemical, Environmental and Bioscience Engineering, Research Area Biochemical Engineering, Technische Universität Wien, Vienna, Austria.
Rainer KrullInstitute of Biochemical Engineering, Technische Universität Braunschweig, Braunschweig, Germany.ORCID 0000-0003-2821-8610
Technische Universität Braunschweig · DETechnical University of Munich · DETU Wien · AT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cell morphology of filamentous microorganisms is highly interesting during cultivations as it is often linked to productivity and can be influenced by process conditions. Hence, the characterization of cell morphology is of major importance to improve the understanding of industrial processes with filamentous microorganisms. For this purpose, reliable and robust methods are necessary. In this study, pellet morphology and physiology of the rebeccamycin producing filamentous actinomycete Lentzea aerocolonigenes were investigated by microscopy and flow cytometry. Both methods were compared regarding their applicability. To achieve different morphologies, a cultivation with glass bead addition (Ø = 969 μm, 100 g L-1) was compared to an unsupplemented cultivation. This led to two different macro-morphologies. Furthermore, glass bead addition increased rebeccamycin titers after 10 days of cultivation (95 mg L-1 with glass beads, 38 mg L-1 without glass beads). Macro-morphology and viability were investigated through microscopy and flow cytometry. For viability assessment fluorescent staining was used additionally. Smaller, more regular pellets were found for glass bead addition. Pellet diameters resulting from microscopy followed by image analysis were 172 μm without and 106 μm with glass beads, diameters from flow cytometry were 170 and 100 μm, respectively. These results show excellent agreement of both methods, each considering several thousand pellets. Furthermore, the pellet viability obtained from both methods suggested an enhanced metabolic activity in glass bead treated pellets during the exponential production phase. However, total viability values differ for flow cytometry (0.32 without and 0.41 with glass beads) and confocal laser scanning microscopy of single stained pellet slices (life ratio in production phase of 0.10 without and 0.22 with glass beads), which is probably caused by the different numbers of investigated pellets. In confocal laser scanning microscopy only one pellet per sample could be investigated while flow cytometry considered at least 50 pellets per sample, resulting in an increased statistical reliability.

Indexed as

ActinomycetalesCarbazolesChromatography, High Pressure LiquidFlow CytometryImage Processing, Computer-AssistedMicroscopyMicroscopy, ConfocalCarbazolesrebeccamycin

Identifiers

PMID32492063
PMCPMC7269266
OpenAlexW3029799061

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.