Evidence map›Paper›PMID 32490522›Full record

ArticleFEMS yeast research2020

A homologous overexpression system to study roles of drug transporters in Candida glabrata.

Sonam Kumari, Mohit Kumar, Nitesh Kumar Khandelwal, Ajay Kumar Pandey, Priyanka Bhakt, Rupinder Kaur, Rajendra Prasad, Naseem A Gaur

Open access · bronzeAbstract read
In one paragraph

Article in FEMS yeast research, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.2field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Sonam KumariYeast Biofuel Group, International Centre for Genetic Engineering and Biotechnology, New Delhi, 110067, India.
Mohit KumarYeast Biofuel Group, International Centre for Genetic Engineering and Biotechnology, New Delhi, 110067, India.
Nitesh Kumar KhandelwalYeast Biofuel Group, International Centre for Genetic Engineering and Biotechnology, New Delhi, 110067, India.
Ajay Kumar PandeyYeast Biofuel Group, International Centre for Genetic Engineering and Biotechnology, New Delhi, 110067, India.
Priyanka BhaktLaboratory of Fungal Pathogenesis, Centre for DNA Fingerprinting and Diagnostics, Hyderabad, 500039, Telangana, India.
Rupinder KaurLaboratory of Fungal Pathogenesis, Centre for DNA Fingerprinting and Diagnostics, Hyderabad, 500039, Telangana, India.
Rajendra PrasadAmity Institute of Integrative Science and Health and Amity Institute of Biotechnology, Amity University, Gurgaon, 122413, Haryana, India.
Naseem A GaurYeast Biofuel Group, International Centre for Genetic Engineering and Biotechnology, New Delhi, 110067, India.
International Centre for Genetic Engineering and Biotechnology · INCentre for DNA Fingerprinting and Diagnostics · IN

Funding

DBT-Wellcome Trust India Alliance IA/S/15/1/501831Wellcome Trust
6 · The paper itself

Abstract

Considering the relevance of drug transporters belonging to ABC and MFS superfamilies in pathogenic Candida species, there has always been a need to have an overexpression system where these membrane proteins for functional analysis could be expressed in a homologous background. We could address this unmet need by constructing a highly drug-susceptible Candida glabrata strain deleted in seven dominant ABC transporters genes such as CgSNQ2, CgAUS1, CgCDR1, CgPDH1, CgYCF1, CgYBT1 and CgYOR1 and introduced a GOF mutation in transcription factor (TF) CgPDR1 leading to a hyper-activation of CgCDR1 locus. The expression system was validated by overexpressing four GFP tagged ABC (CgCDR1, CgPDH1, CaCDR1 and ScPDR5) and an MFS (CgFLR1) transporters genes facilitated by an engineered expression plasmid to integrate at the CgCDR1 locus. The properly expressed and localized transporters were fully functional, as was revealed by their several-fold increased drug resistance, growth kinetics, localization studies and efflux activities. The present homologous system will facilitate in determining the role of an individual transporter for its substrate specificity, drug efflux, pathogenicity and virulence traits without the interference of other major transporters.

Indexed as

Gene Expression Regulation, FungalAntifungal AgentsATP-Binding Cassette TransportersBiological TransportCandida glabrataGene DeletionKineticsMutationAntifungal AgentsATP-Binding Cassette TransportersABC transportersazolesCandida glabrataexpression plasmidGOF mutationmulti-deletion

Identifiers

PMID32490522
PMCPMC7611192
OpenAlexW3031116948

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.