Evidence map›Paper›PMID 32490215›Full record

ArticleBiochemistry and biophysics reports2020

Cellular phosphatidic acid sensor, α-synuclein N-terminal domain, detects endogenous phosphatidic acid in macrophagic phagosomes and neuronal growth cones.

Haruka Yamada, Fumi Hoshino, Qiang Lu, Fumio Sakane

Open access · goldAbstract read
In one paragraph

Article in Biochemistry and biophysics reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.5field-weighted citation impact, top 42% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Haruka YamadaDepartment of Chemistry, Graduate School of Science, Chiba University, Chiba, 263-8522, Japan.
Fumi HoshinoDepartment of Chemistry, Graduate School of Science, Chiba University, Chiba, 263-8522, Japan.
Qiang LuDepartment of Chemistry, Graduate School of Science, Chiba University, Chiba, 263-8522, Japan.
Fumio SakaneDepartment of Chemistry, Graduate School of Science, Chiba University, Chiba, 263-8522, Japan.
Chiba University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Phosphatidic acid (PA) is the simplest phospholipid and is involved in the regulation of various cellular events. Recently, we developed a new PA sensor, the N-terminal region of α-synuclein (α-Syn-N). However, whether α-Syn-N can sense physiologically produced, endogenous PA remains unclear. We first established an inactive PA sensor (α-Syn-N-KQ) as a negative control by replacing all eleven lysine residues with glutamine residues. Using confocal microscopy, we next verified that α-Syn-N, but not α-Syn-N-KQ, detected PA in macrophagic phagosomes in which PA is known to be enriched, further indicating that α-Syn-N can be used as a reliable PA sensor in cells. Finally, because PA generated during neuronal differentiation is critical for neurite outgrowth, we investigated the subcellular distribution of PA using α-Syn-N. We found that α-Syn-N, but not α-Syn-N-KQ, accumulated at the peripheral regions (close to the plasma membrane) of neuronal growth cones. Experiments using a phospholipase D (PLD) inhibitor strongly suggested that PA in the peripheral regions of the growth cone was primarily produced by PLD. Our findings provide a reliable sensor of endogenous PA and novel insights into the distribution of PA during neuronal differentiation.

Indexed as

DGK, diacylglycerol kinaseDiacylglycerol kinaseDMEM, Dulbecco's modified Eagle's mediumF-actin, filamentous actinFIPI, 5-fluoro-2-indolyl deschlorohalopemideGrowth coneLipid sensorLPAAT, LPA acyltransferaseLPA, lysophosphatidic acidMyr, myristoylatedPABD, phosphatidic acid-binding domainPA, phosphatidic acidPC, phosphatidylcholinePhagosomePhosphatidic acidPhospholipase DPLD, phospholipase Dα-Syn-N, N-terminal region of α-Synα-Synucleinα-Syn, α-synuclein

Identifiers

PMID32490215
PMCPMC7261706
OpenAlexW3026637783

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.