Evidence map›Paper›PMID 32488648›Full record

ArticleRice (New York, N.Y.)2020

Proteomic Analysis of Rice Subjected to Low Light Stress and Overexpression of OsGAPB Increases the Stress Tolerance.

Yangxuan Liu, Ting Pan, Yuying Tang, Yong Zhuang, Zhijian Liu, Penghui Li, Hui Li, Weizao Huang, Shengbin Tu, Guangjun Ren and 2 more

Open access · goldAbstract read
In one paragraph

Article in Rice (New York, N.Y.), 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
4.6field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 38 citations in OpenAlex.

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  13. Rapeseed (Frontiers in plant science · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 2 countries.

Yangxuan LiuChengdu Institute of Biology, Chinese Academy of Sciences, Chengdu, 610041, China.
Ting PanChengdu Institute of Biology, Chinese Academy of Sciences, Chengdu, 610041, China.
Yuying TangChengdu Institute of Biology, Chinese Academy of Sciences, Chengdu, 610041, China.
Yong ZhuangChengdu Institute of Biology, Chinese Academy of Sciences, Chengdu, 610041, China.
Zhijian LiuChengdu Institute of Biology, Chinese Academy of Sciences, Chengdu, 610041, China.
Penghui LiChengdu Institute of Biology, Chinese Academy of Sciences, Chengdu, 610041, China.
Hui LiChengdu Institute of Biology, Chinese Academy of Sciences, Chengdu, 610041, China.
Weizao HuangChengdu Institute of Biology, Chinese Academy of Sciences, Chengdu, 610041, China.
Shengbin TuChengdu Institute of Biology, Chinese Academy of Sciences, Chengdu, 610041, China.
Guangjun RenCrop Research Institute, Sichuan Academy of Agricultural Sciences, Chengdu, 610066, People's Republic of China.
Tao WangChengdu Institute of Biology, Chinese Academy of Sciences, Chengdu, 610041, China.
Songhu WangChengdu Institute of Biology, Chinese Academy of Sciences, Chengdu, 610041, China. wangsh1@cib.ac.cn.ORCID http://orcid.org/0000-0002-7822-769X
Chinese Academy of Sciences · CNAnhui Agricultural University · CNSichuan Academy of Agricultural Sciences · CN

Funding

National Key Research and Development Program "Seven Crop Breeding" key project of China 2017YFD0100201
6 · The paper itself

Abstract

backgroundLight provides the energy for photosynthesis and determines plant morphogenesis and development. Low light compromises photosynthetic efficiency and leads to crop yield loss. It remains unknown how rice responds to low light stress at a proteomic level.

resultsIn this study, the quantitative proteomic analysis with isobaric tags for relative and absolute quantitation (iTRAQ) was used and 1221 differentially expressed proteins (DEPs) were identified from wild type rice plants grown in control or low light condition (17% light intensity of control), respectively. Bioinformatic analysis of DEPs indicated low light remarkably affects the abundance of chloroplastic proteins. Specifically, the proteins involved in carbon fixation (Calvin cycle), electron transport, and ATPase complex are severely downregulated under low light. Furthermore, overexpression of the downregulated gene encoding rice β subunit of glyceraldehyde-3-phosphate dehydrogenase (OsGAPB), an enzyme in Calvin cycle, significantly increased the CO

conclusionOur results revealed that low light stress on vegetative stage of rice inhibits photosynthesis possibly by decreasing the photosynthetic proteins and OsGAPB gene is a good candidate for manipulating rice tolerance to low light stress.

Identifiers

PMID32488648
PMCPMC7266901
OpenAlexW3028988125

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.