Evidence map›Paper›PMID 32488093›Full record

ArticleScientific reports2020

A disulfide constrains the ToxR periplasmic domain structure, altering its interactions with ToxS and bile-salts.

Charles R Midgett, Rachel A Swindell, Maria Pellegrini, F Jon Kull

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.5field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Article
  3. mBio · 2024
    Article
  4. Article
  5. ToxR activates theProceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  6. Structural Insights into Regulation of Vibrio Virulence Gene Networks.Advances in experimental medicine and biology · 2023
    Article
  7. Co-component signal transduction systems: Fast-evolving virulence regulation cassettes discovered in enteric bacteria.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  8. Article
  9. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Charles R MidgettDepartment of Chemistry, Dartmouth College, Hanover, NH, USA. charles.midgett@dartmouth.edu.
Rachel A SwindellDepartment of Chemistry, Dartmouth College, Hanover, NH, USA.
Maria PellegriniDepartment of Chemistry, Dartmouth College, Hanover, NH, USA.
F Jon KullDepartment of Chemistry, Dartmouth College, Hanover, NH, USA.
Dartmouth College · US

Funding

Translational Engineering in Cancer (TEC)P30CA023108 · NCI · DARTMOUTH COLLEGE · PI Steven D Leach · 1985 to 2026
$91.3M
X-ray Scattering Technology CoreP30GM133893 · NIGMS · BROOKHAVEN SCIENCE ASSOC-BROOKHAVEN LAB · PI Sean McSweeney · 2019 to 2026
$38.6M
Understanding the role of RNA-binding protein mutations in cancerP20GM113132 · NIGMS · DARTMOUTH COLLEGE · PI MADDEN, DEAN R · 2016 to 2025
$25.9M
Targeting the IKK-Binding Domain of NEMO for Inhibitors DiscoveryR01GM133844 · NIGMS · DARTMOUTH COLLEGE · PI PELLEGRINI, MARIA MARGHERITA · 2019 to 2022
$1.5M
Structural regulation and response to bile salt induced stress of the Vibrio cholerae virulence factor ToxR and its binding partner ToxSR21AI140740 · NIAID · DARTMOUTH COLLEGE · PI KULL, FREDRICK JON · 2018 to 2019
$451k
NCI NIH HHS P30 CA023108NIAID NIH HHS R21 AI140740NIGMS NIH HHS P20 GM113132NIGMS NIH HHS P30 GM133893NIGMS NIH HHS R01 GM133844
6 · The paper itself

Abstract

ToxR is a transmembrane transcription factor that, together with its integral membrane periplasmic binding partner ToxS, is conserved across the Vibrionaceae family. In some pathogenic Vibrios, including V. parahaemolyticus and V. cholerae, ToxR is required for bile resistance and virulence, and ToxR is fully activated and protected from degradation by ToxS. ToxS achieves this in part by ensuring formation of an intra-chain disulfide bond in the C-terminal periplasmic domain of ToxR (dbToxRp). In this study, biochemical analysis showed dbToxRp to have a higher affinity for the ToxS periplasmic domain than the non-disulfide bonded conformation. Analysis of our dbToxRp crystal structure showed this is due to disulfide bond stabilization. Furthermore, dbToxRp is structurally homologous to the V. parahaemolyticus VtrA periplasmic domain. These results highlight the critical structural role of disulfide bond in ToxR and along with VtrA define a domain fold involved in environmental sensing conserved across the Vibrionaceae family.

Indexed as

Bacterial ProteinsBile Acids and SaltsCalorimetry, Differential ScanningCrystallography, X-RayDisulfidesDNA-Binding ProteinsMembrane ProteinsModels, MolecularPeriplasmProtein DomainsProtein MultimerizationTranscription FactorsBacterial ProteinsBile Acids and SaltsDisulfidesDNA-Binding ProteinsMembrane ProteinstoxR protein, bacteriatoxR protein, Vibrio choleraeToxS protein, Vibrio choleraeTranscription Factors

Identifiers

PMID32488093
PMCPMC7265457
OpenAlexW3032211010

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.