Evidence map›Paper›PMID 32487740›Full record

ArticlemSystems2020

Comparative Genomics and Metabolomics in the Genus

Daniel Männle, Shaun M K McKinnie, Shrikant S Mantri, Katharina Steinke, Zeyin Lu, Bradley S Moore, Nadine Ziemert, Leonard Kaysser

Abstract read
In one paragraph

Article in mSystems, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed.

  1. Article
  2. Article
  3. Comparative genomics ofFrontiers in microbiology · 2026
    Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. mBio · 2025
    Article
  9. The genus Nocardia as a source of new antimicrobials.npj antimicrobials and resistance · 2025
    Review
  10. Article
  11. Article
  12. Article
  13. NPAnalytical chemistry · 2024
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Daniel MännlePharmaceutical Biology, Eberhard Karls University Tübingen, Tübingen, Germany.ORCID https://orcid.org/0000-0001-8437-3071
Shaun M K McKinnieDepartment of Chemistry and Biochemistry, University of California, Santa Cruz, California, USA.ORCID https://orcid.org/0000-0001-6776-6455
Shrikant S MantriGerman Centre for Infection Research (DZIF), Tübingen, Germany.ORCID https://orcid.org/0000-0002-7493-459X
Katharina SteinkeGerman Centre for Infection Research (DZIF), Tübingen, Germany.
Zeyin LuPharmaceutical Biology, Eberhard Karls University Tübingen, Tübingen, Germany.
Bradley S MooreScripps Institution of Oceanography, University of California, San Diego, California, USA.ORCID https://orcid.org/0000-0002-4652-1253
Nadine ZiemertGerman Centre for Infection Research (DZIF), Tübingen, Germany nadine.ziemert@uni-tuebingen.de leonard.kaysser@uni-tuebingen.de.ORCID https://orcid.org/0000-0002-7264-1857
Leonard KaysserPharmaceutical Biology, Eberhard Karls University Tübingen, Tübingen, Germany nadine.ziemert@uni-tuebingen.de leonard.kaysser@uni-tuebingen.de.ORCID https://orcid.org/0000-0002-3943-993X

Funding

Natural Product Genome MiningR01GM085770 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI JENSEN, PAUL R, MOORE, BRADLEY S · 2009 to 2024
$5.8M
NIGMS NIH HHS R01 GM085770
6 · The paper itself

Abstract

Using automated genome analysis tools, it is often unclear to what degree genetic variability in homologous biosynthetic pathways relates to structural variation. This hampers strain prioritization and compound identification and can lead to overinterpretation of chemical diversity. Here, we assessed the metabolic potential of

Indexed as

biosynthetic gene clustergenome mininggenomicsmetabolomicsnatural productsNocardiasiderophores

Identifiers

PMID32487740
PMCPMC7413640

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.