Evidence map›Paper›PMID 32487216›Full record

ArticleMicrobial cell factories2020

Optimization of hydrogenobyrinic acid biosynthesis in Escherichia coli using multi-level metabolic engineering strategies.

Pingtao Jiang, Huan Fang, Jing Zhao, Huina Dong, Zhaoxia Jin, Dawei Zhang

Open access · goldAbstract read
In one paragraph

Article in Microbial cell factories, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.5field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Multi-modular metabolic engineering of heme synthesis inSynthetic and systems biotechnology · 2024
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Pingtao JiangSchool of Biological Engineering, Dalian Polytechnic University, Dalian, 116034, China.
Huan FangTianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, Tianjin, 300308, China.
Jing ZhaoTianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, Tianjin, 300308, China.
Huina DongTianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, Tianjin, 300308, China.
Zhaoxia JinSchool of Biological Engineering, Dalian Polytechnic University, Dalian, 116034, China. jinzx2018@163.com.
Dawei ZhangTianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, Tianjin, 300308, China. zhang_dw@tib.cas.cn.ORCID http://orcid.org/0000-0001-5555-6151
Chinese Academy of Sciences · CNDalian Polytechnic University · CN

Funding

National Key R&D Program of China 2018YFA0900300National Natural Science Foundation of China 31670604National Natural Science Foundation of China 31900052National Natural Science Foundation of China 31970324Natural Science Foundation of Liaoning Province of China 20180550237Youth Innovation Promotion Association of the Chinese Academy of Sciences 2020182
6 · The paper itself

Abstract

backgroundHydrogenobyrinic acid is a key intermediate of the de-novo aerobic biosynthesis pathway of vitamin B

resultsBy designing combinatorial ribosomal binding site libraries of the hemABCD genes in vivo, we found that their optimal relative translational initiation rates are 10:1:1:5. The transcriptional coordination of the uroporphyrinogen III biosynthetic module was realized by promoter engineering of the hemABCD operon. Knockdown of competitive heme and siroheme biosynthesis pathways by RBS engineering enhanced the hydrogenobyrinic acid titer to 20.54 and 15.85 mg L

conclusionsThrough multi-level metabolic engineering strategies, we achieved the metabolic balance of the uroporphyrinogen III biosynthesis pathway, eliminated toxicity due to by-product accumulation, and finally achieved a high HBA titer of 22.57 mg L

Indexed as

Escherichia coli ProteinsMetabolic EngineeringEscherichia coliOperonUroporphyrinsVitamin B 12Escherichia coli Proteinshydrogenobyrinic acidUroporphyrinsVitamin B 12Escherichia coliHydrogenobyrinic acidMetabolic engineeringRibosomal binding site librariesUroporphyrinogen III

Identifiers

PMID32487216
PMCPMC7268678
OpenAlexW3029915820

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.