Evidence map›Paper›PMID 32486971›Full record

ArticleEmerging microbes & infections2020

Isolation and characterization of a duck-origin goose astrovirus in China.

Feng Wei, Jing Yang, Yueming Wang, Hao Chen, Youxiang Diao, Yi Tang

Open access · goldAbstract read
In one paragraph

Article in Emerging microbes & infections, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
0.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 52 citations in OpenAlex.

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  18. Complete genome sequence and phylogenetic analysis of a goose astrovirus isolate in China.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Feng WeiCollege of Animal Science and Technology, Shandong Agricultural University, Tai'an, People's Republic of China.
Jing YangCollege of Animal Science and Technology, Shandong Agricultural University, Tai'an, People's Republic of China.
Yueming WangCollege of Animal Science and Technology, Shandong Agricultural University, Tai'an, People's Republic of China.
Hao ChenCollege of Animal Science and Technology, Shandong Agricultural University, Tai'an, People's Republic of China.
Youxiang DiaoCollege of Animal Science and Technology, Shandong Agricultural University, Tai'an, People's Republic of China.
Yi TangCollege of Animal Science and Technology, Shandong Agricultural University, Tai'an, People's Republic of China.
Shandong Center for Disease Control and Prevention · CNShandong Agricultural University · CNQufu Normal University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In 2019, a new type of infectious disease characterized with haemorrhage and swellings of kidneys, occurred on commercial duck farms in Shandong province, China. Our systematic investigation led to the isolation of an astrovirus, designated AstV-SDTA strain and was isolated from a diseased duckling using LMH cells. Similar clinical symptoms were reproduced by experimental infection using the AstV-SDTA strain. The complete genome sequencing characterization of AstV-SDTA was conducted using next-generation sequencing (NGS) technique on Illumina HiSeq platform, and used polymerase chain reaction method to verify the NGS results for the obtained whole sequences. Phylogenetic analysis revealed that AstV-SDTA strain belongs to a novel goose astrovirus (GoAstV) branch of avian astroviruses, and the nucleotide homology based on the complete genome sequences among AstV-SDTA and other GoAstV strains deposited in Genbank was 97.2-98.8%. Taken together, these results suggest that the cross-species transmission of novel GoAstV between domestic waterfowl is possible. Further surveillance of novel GoAstV in poultry are needed in order to gain a better understanding of both the molecular and evolutionary characteristics of novel GoAstV.

Indexed as

AnimalsAstroviridae InfectionsAvastrovirusChinaDucksGeeseGenome, ViralHigh-Throughput Nucleotide SequencingKidneyPhylogenyPoultry DiseasesWhole Genome Sequencingducklingsnext-generation sequencingNovel goose astrovirusphylogenetic analysis

Identifiers

PMID32486971
PMCPMC7448921
OpenAlexW3029123932

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.