Evidence map›Paper›PMID 32486949›Full record

ArticleJournal of the Royal Society, Interface2020

Climatological, virological and sociological drivers of current and projected dengue fever outbreak dynamics in Sri Lanka.

Caroline E Wagner, Milad Hooshyar, Rachel E Baker, Wenchang Yang, Nimalan Arinaminpathy, Gabriel Vecchi, C Jessica E Metcalf, Amilcare Porporato, Bryan T Grenfell

Abstract read
In one paragraph

Article in Journal of the Royal Society, Interface, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed, 2 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 2 syntheses or guidelines pooled it.

  1. Pooled it
  2. Pooled it
  3. Article
  4. Climate, demography, immunology, and virology combine to drive two decades of dengue virus dynamics in Cambodia.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  5. Article
  6. Infectious disease in an era of global change.Nature reviews. Microbiology · 2022
    Review
  7. Impact of environmental factors on the spread of dengue fever in Sri Lanka.International journal of environmental science and technology : IJEST · 2022
    Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Caroline E WagnerDepartment of Ecology and Evolutionary Biology, Princeton University, Princeton, NJ 08544, USA.
Milad HooshyarPrinceton Environmental Institute, Princeton University, Princeton, NJ 08544, USA.
Rachel E BakerDepartment of Ecology and Evolutionary Biology, Princeton University, Princeton, NJ 08544, USA.
Wenchang YangPrinceton Environmental Institute, Princeton University, Princeton, NJ 08544, USA.
Nimalan ArinaminpathyDepartment of Infectious Disease Epidemiology, Imperial College School of Medicine, London, UK.
Gabriel VecchiPrinceton Environmental Institute, Princeton University, Princeton, NJ 08544, USA.
C Jessica E MetcalfDepartment of Ecology and Evolutionary Biology, Princeton University, Princeton, NJ 08544, USA.
Amilcare PorporatoPrinceton Environmental Institute, Princeton University, Princeton, NJ 08544, USA.
Bryan T GrenfellDepartment of Ecology and Evolutionary Biology, Princeton University, Princeton, NJ 08544, USA.

Funding

Medical Research Council MR/R015600/1
6 · The paper itself

Abstract

The largest ever Sri Lankan dengue outbreak of 2017 provides an opportunity for investigating the relative contributions of climatological, epidemiological and sociological drivers on the epidemic patterns of this clinically important vector-borne disease. To do so, we develop a climatologically driven disease transmission framework for dengue virus using spatially resolved temperature and precipitation data as well as the time-series susceptible-infected-recovered (SIR) model. From this framework, we first demonstrate that the distinct climatological patterns encountered across the island play an important role in establishing the typical yearly temporal dynamics of dengue, but alone are unable to account for the epidemic case numbers observed in Sri Lanka during 2017. Using a simplified two-strain SIR model, we demonstrate that the re-introduction of a dengue virus serotype that had been largely absent from the island in previous years may have played an important role in driving the epidemic, and provide a discussion of the possible roles for extreme weather events and human mobility patterns on the outbreak dynamics. Lastly, we provide estimates for the future burden of dengue across Sri Lanka using the Coupled Model Intercomparison Phase 5 climate projections. Critically, we demonstrate that climatological and serological factors can act synergistically to yield greater projected case numbers than would be expected from the presence of a single driver alone. Altogether, this work provides a holistic framework for teasing apart and analysing the various complex drivers of vector-borne disease outbreak dynamics.

Indexed as

DengueClimateDisease OutbreaksHumansSri LankaTemperatureclimate and diseasedenguedisease modellingserotypetime-series susceptible-infected-recovered

Identifiers

PMID32486949
PMCPMC7328388

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.