Evidence map›Paper›PMID 32484799›Full record

ArticleThe Journal of clinical investigation2020

Disease-associated CTNNBL1 mutation impairs somatic hypermutation by decreasing nuclear AID.

Marcel Kuhny, Lisa R Forbes, Elif Çakan, Andrea Vega-Loza, Valentyna Kostiuk, Ravi K Dinesh, Salomé Glauzy, Asbjorg Stray-Pedersen, Ashley E Pezzi, I Celine Hanson and 11 more

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of clinical investigation, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 23 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 4 institutions in 2 countries.

Marcel KuhnyDepartment of Immunobiology, Yale University School of Medicine, New Haven, Connecticut, USA.
Lisa R ForbesSection of Pediatric Allergy, Immunology, and Rheumatology, Department of Pediatrics, Baylor College of Medicine, Houston, Texas, USA.
Elif ÇakanDepartment of Immunobiology, Yale University School of Medicine, New Haven, Connecticut, USA.
Andrea Vega-LozaDepartment of Immunobiology, Yale University School of Medicine, New Haven, Connecticut, USA.
Valentyna KostiukDepartment of Immunobiology, Yale University School of Medicine, New Haven, Connecticut, USA.
Ravi K DineshDepartment of Immunobiology, Yale University School of Medicine, New Haven, Connecticut, USA.
Salomé GlauzyDepartment of Immunobiology, Yale University School of Medicine, New Haven, Connecticut, USA.
Asbjorg Stray-PedersenBaylor-Hopkins Center for Mendelian Genomics, Houston, Texas, USA.
Ashley E PezziDepartment of Dermatology, Baylor College of Medicine, Houston, Texas, USA.
I Celine HansonSection of Pediatric Allergy, Immunology, and Rheumatology, Department of Pediatrics, Baylor College of Medicine, Houston, Texas, USA.
Alexander Vargas-HernandezSection of Pediatric Allergy, Immunology, and Rheumatology, Department of Pediatrics, Baylor College of Medicine, Houston, Texas, USA.
Mina LuQuing XuDepartment of Pathology, Yale University School of Medicine, New Haven, Connecticut, USA.
Zeynep H Coban-AkdemirBaylor-Hopkins Center for Mendelian Genomics, Houston, Texas, USA.
Shalini N JhangianiDepartment of Molecular and Human Genetics and.
Donna M MuznyDepartment of Molecular and Human Genetics and.
Richard A GibbsBaylor-Hopkins Center for Mendelian Genomics, Houston, Texas, USA.
James R LupskiBaylor-Hopkins Center for Mendelian Genomics, Houston, Texas, USA.
Ivan K ChinnSection of Pediatric Allergy, Immunology, and Rheumatology, Department of Pediatrics, Baylor College of Medicine, Houston, Texas, USA.
David G SchatzDepartment of Immunobiology, Yale University School of Medicine, New Haven, Connecticut, USA.
Jordan S OrangeDepartment of Pediatrics, College of Physicians and Surgeons of Columbia University, New York-Presbyterian Morgan Stanley Children's Hospital, New York, New York, USA.
Eric MeffreDepartment of Immunobiology, Yale University School of Medicine, New Haven, Connecticut, USA.
Baylor College of Medicine · USYale University · USMorgan Stanley Children's Hospital · USOslo University Hospital · NO

Funding

Yale Clinical and Translational Science Award (U Component)UL1TR001863 · NCATS · YALE UNIVERSITY · PI John H. Krystal, LUCILA OHNO-MACHADO · 2016 to 2026
$102.9M
MEDICAL SCIENTIST TRAINING PROGRAMT32GM007205 · NIGMS · YALE UNIVERSITY · PI KAZMIERCZAK, BARBARA I · 1985 to 2019
$42.9M
Regulation of IgA class switching in the intestinal mucosaP01AI061093 · NIAID · MOUNT SINAI SCHOOL OF MEDICINE OF NYU · PI CUNNINGHAM-RUNDLES, CHARLOTTE · 2004 to 2021
$29.8M
Baylor-Johns Hopkins Center for Mendelian GeneticsUM1HG006542 · NHGRI · JOHNS HOPKINS UNIVERSITY · PI VALLE, DAVID · 2016 to 2020
$14.5M
Targeting of somatic hypermutation in the genomeR01AI127642 · NIAID · YALE UNIVERSITY · PI SCHATZ, DAVID G. · 2017 to 2025
$4.6M
NCATS NIH HHS UL1 TR001863NHGRI NIH HHS UM1 HG006542NIAID NIH HHS P01 AI061093NIAID NIH HHS R01 AI127642NIGMS NIH HHS T32 GM007205
6 · The paper itself

Abstract

Patients with common variable immunodeficiency associated with autoimmune cytopenia (CVID+AIC) generate few isotype-switched B cells with severely decreased frequencies of somatic hypermutations (SHMs), but their underlying molecular defects remain poorly characterized. We identified a CVID+AIC patient who displays a rare homozygous missense M466V mutation in β-catenin-like protein 1 (CTNNBL1). Because CTNNBL1 binds activation-induced cytidine deaminase (AID) that catalyzes SHM, we tested AID interactions with the CTNNBL1 M466V variant. We found that the M466V mutation interfered with the association of CTNNBL1 with AID, resulting in decreased AID in the nuclei of patient EBV-transformed B cell lines and of CTNNBL1 466V/V Ramos B cells engineered to express only CTNNBL1 M466V using CRISPR/Cas9 technology. As a consequence, the scarce IgG+ memory B cells from the CTNNBL1 466V/V patient showed a low SHM frequency that averaged 6.7 mutations compared with about 18 mutations per clone in healthy-donor counterparts. In addition, CTNNBL1 466V/V Ramos B cells displayed a decreased incidence of SHM that was reduced by half compared with parental WT Ramos B cells, demonstrating that the CTNNBL1 M466V mutation is responsible for defective SHM induction. We conclude that CTNNBL1 plays an important role in regulating AID-dependent antibody diversification in humans.

Indexed as

Apoptosis Regulatory ProteinsB-LymphocytesCommon Variable ImmunodeficiencyHomozygoteMutation, MissenseNuclear ProteinsSomatic Hypermutation, ImmunoglobulinAICDA (Activation-Induced Cytidine Deaminase)Amino Acid SubstitutionCell LineChild, PreschoolCytidine DeaminaseFemaleHumansImmunologic MemoryAICDA (Activation-Induced Cytidine Deaminase)Apoptosis Regulatory ProteinsCTNNBL1 protein, humanCytidine DeaminaseNuclear ProteinsAutoimmune diseasesAutoimmunityB cellsImmunology

Identifiers

PMID32484799
PMCPMC7410074
OpenAlexW3028893221

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.