Evidence map›Paper›PMID 32484292›Full record

ArticleEMBO reports2020

Extensive flavivirus E trimer breathing accompanies stem zippering of the post-fusion hairpin.

Iris Medits, Marie-Christine Vaney, Alexander Rouvinski, Martial Rey, Julia Chamot-Rooke, Felix A Rey, Franz X Heinz, Karin Stiasny

Abstract read
In one paragraph

Article in EMBO reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Computational design of prefusion-stabilized Herpesvirus gB trimers.bioRxiv : the preprint server for biology · 2024
    Article
  5. Strategies of rational and structure-driven vaccine design for Arenaviruses.Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases · 2024
    Review
  6. Review
  7. Article
  8. Review
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Iris Medits *Center for Virology, Medical University of Vienna, Vienna, Austria.
Marie-Christine Vaney *Unité de Virologie Structurale, Institut Pasteur, CNRS UMR 3569 Virologie, Paris, France.
Alexander RouvinskiUnité de Virologie Structurale, Institut Pasteur, CNRS UMR 3569 Virologie, Paris, France.
Martial ReyUnité de Spectrométrie de Masse pour la Biologie, Institut Pasteur, CNRS USR 2000, Paris, France.
Julia Chamot-RookeUnité de Spectrométrie de Masse pour la Biologie, Institut Pasteur, CNRS USR 2000, Paris, France.
Felix A ReyUnité de Virologie Structurale, Institut Pasteur, CNRS UMR 3569 Virologie, Paris, France.ORCID 0000-0002-9953-7988
Franz X HeinzCenter for Virology, Medical University of Vienna, Vienna, Austria.ORCID 0000-0002-7191-4331
Karin StiasnyCenter for Virology, Medical University of Vienna, Vienna, Austria.ORCID 0000-0002-1902-8674

Funding

Austrian Science Fund FWF I 1378Austrian Science Fund FWF P 27501
6 · The paper itself

Abstract

Flaviviruses enter cells by fusion with endosomal membranes through a rearrangement of the envelope protein E, a class II membrane fusion protein, into fusogenic trimers. The rod-like E subunits bend into "hairpins" to bring the fusion loops next to the C-terminal transmembrane (TM) anchors, with the TM-proximal "stem" element zippering the E trimer to force apposition of the membranes. The structure of the complete class II trimeric hairpin is known for phleboviruses but not for flaviviruses, for which the stem is only partially resolved. Here, we performed comparative analyses of E-protein trimers from the tick-borne encephalitis flavivirus with sequential stem truncations. Our thermostability and antibody-binding data suggest that the stem "zipper" ends at a characteristic flavivirus conserved sequence (CS) that cloaks the fusion loops, with the downstream segment not contributing to trimer stability. We further identified a highly dynamic behavior of E trimers C-terminally truncated upstream the CS, which, unlike fully stem-zippered trimers, undergo rapid deuterium exchange at the trimer interface. These results thus identify important "breathing" intermediates in the E-protein-driven membrane fusion process.

Indexed as

Encephalitis Viruses, Tick-BorneMembrane Fusionclass II fusion proteindynamic behaviorflavivirus E trimerfusion intermediatemembrane fusionstem zippering

Identifiers

PMID32484292
PMCPMC7403712

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.