Evidence map›Paper›PMID 32483163›Full record

ArticleScientific reports2020

Expression of a Barhl1a reporter in subsets of retinal ganglion cells and commissural neurons of the developing zebrafish brain.

Shahad Albadri, Olivier Armant, Tairi Aljand-Geschwill, Filippo Del Bene, Matthias Carl, Uwe Strähle, Lucia Poggi

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact, top 95% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 1 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 3 countries.

Shahad AlbadriCentre for Organismal Studies, University of Heidelberg, Heidelberg, Germany.
Olivier ArmantInstitute of Biological and Chemical Systems, Biological Information Processing Karlsruhe Institute of Technology, Eggenstein-Leopoldshafen, Germany.
Tairi Aljand-GeschwillCentre for Organismal Studies, University of Heidelberg, Heidelberg, Germany.
Filippo Del BeneInstitut de la Vision, Sorbonne Université, INSERM, CNRS, Paris, France.
Matthias CarlDepartment of Cellular, Computational and Integrative Biology - CIBIO, University of Trento, Trento, Italy.
Uwe SträhleInstitute of Biological and Chemical Systems, Biological Information Processing Karlsruhe Institute of Technology, Eggenstein-Leopoldshafen, Germany.
Lucia PoggiCentre for Organismal Studies, University of Heidelberg, Heidelberg, Germany. lucia.poggi@unitn.it.
Heidelberg University · DEKarlsruhe Institute of Technology · DEUniversity of Trento · ITInserm · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Promoting the regeneration or survival of retinal ganglion cells (RGCs) is one focus of regenerative medicine. Homeobox Barhl transcription factors might be instrumental in these processes. In mammals, only barhl2 is expressed in the retina and is required for both subtype identity acquisition of amacrine cells and for the survival of RGCs downstream of Atoh7, a transcription factor necessary for RGC genesis. The underlying mechanisms of this dual role of Barhl2 in mammals have remained elusive. Whole genome duplication in the teleost lineage generated the barhl1a and barhl2 paralogues. In the Zebrafish retina, Barhl2 functions as a determinant of subsets of amacrine cells lineally related to RGCs independently of Atoh7. In contrast, barhl1a expression depends on Atoh7 but its expression dynamics and function have not been studied. Here we describe for the first time a Barhl1a reporter line in vivo showing that barhl1a turns on exclusively in subsets of RGCs and their post-mitotic precursors. We also show transient expression of barhl1a:GFP in diencephalic neurons extending their axonal projections as part of the post-optic commissure, at the time of optic chiasm formation. This work sets the ground for future studies on RGC subtype identity, axonal projections and genetic specification of Barhl1a-positive RGCs and commissural neurons.

Indexed as

Gene Expression Regulation, DevelopmentalAmacrine CellsAnimalsAxonsCell LineageDiencephalonDNA-Binding ProteinsGene DuplicationGenes, ReporterHomeodomain ProteinsIntravital MicroscopyMicroscopy, FluorescenceNerve Tissue ProteinsNeural Stem CellsNeuronsOptic Chiasmatoh7 protein, zebrafishDNA-Binding ProteinsHomeodomain ProteinsNerve Tissue ProteinsZebrafish Proteins

Identifiers

PMID32483163
PMCPMC7264323
OpenAlexW3030935737

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.