Evidence map›Paper›PMID 32482893›Full record

ArticleThe Journal of biological chemistry2020

A-kinase-anchoring protein 1 (dAKAP1)-based signaling complexes coordinate local protein synthesis at the mitochondrial surface.

Laura Gabrovsek, Kerrie B Collins, Stacey Aggarwal, Lauren M Saunders, Ho-Tak Lau, Danny Suh, Yasemin Sancak, Cole Trapnell, Shao-En Ong, F Donelson Smith and 1 more

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
1.4field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 43 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 1 institution in 1 country.

Laura GabrovsekDepartment of Pharmacology, University of Washington, Seattle, Washington, USA.
Kerrie B CollinsDepartment of Pharmacology, University of Washington, Seattle, Washington, USA.
Stacey AggarwalDepartment of Pharmacology, University of Washington, Seattle, Washington, USA.
Lauren M SaundersProgram in Molecular and Cellular Biology, University of Washington, Seattle, Washington, USA.ORCID 0000-0003-4377-4252
Ho-Tak LauDepartment of Pharmacology, University of Washington, Seattle, Washington, USA.
Danny SuhDepartment of Pharmacology, University of Washington, Seattle, Washington, USA.
Yasemin SancakDepartment of Pharmacology, University of Washington, Seattle, Washington, USA.
Cole TrapnellDepartment of Genome Sciences, University of Washington, Seattle, Washington, USA.
Shao-En OngDepartment of Pharmacology, University of Washington, Seattle, Washington, USA.
F Donelson SmithDepartment of Pharmacology, University of Washington, Seattle, Washington, USA.ORCID 0000-0002-8080-7589
John D ScottDepartment of Pharmacology, University of Washington, Seattle, Washington, USA scottjdw@uw.edu.ORCID 0000-0002-0367-8146
University of Washington · US

Funding

TRAINING IN MOLECULAR AND CELLULAR BIOLOGYT32GM007270 · NIGMS · UNIVERSITY OF WASHINGTON · PI RAIBLE, DAVID W · 1985 to 2020
$21.0M
CARDIOVASCULAR RESEARCH TRAINING PROGRAMT32HL007828 · NHLBI · UNIVERSITY OF WASHINGTON · PI Francis Kim, Farid Moussavi-Harami · 1997 to 2026
$10.2M
Defective PKA Signaling in Cushing's SyndromeR01DK119192 · NIDDK · UNIVERSITY OF WASHINGTON · PI John D Scott · 2018 to 2026
$4.4M
Charting the regulatory topography of the cell differentiation landscape with single-cell RNA-Seq.DP2HD088158 · NICHD · UNIVERSITY OF WASHINGTON · PI TRAPNELL, BRUCE COLSTON · 2015 to 2015
$2.3M
Characterizing Muscle Regulatory Elements with Mass Spectrometry-Based ProteomicsR01AR065459 · NIAMS · UNIVERSITY OF WASHINGTON · PI ONG, SHAO-EN · 2013 to 2017
$1.6M
AKAP Modulation of Renal SignalingR01DK119186 · NIDDK · UNIVERSITY OF WASHINGTON · PI SCOTT, JOHN D · 2019 to 2022
$1.5M
Local Signaling in Diabetic ComorbiditiesR01DK105542 · NIDDK · UNIVERSITY OF WASHINGTON · PI SCOTT, JOHN D · 2015 to 2018
$1.4M
NHLBI NIH HHS T32 HL007828NIAMS NIH HHS R01 AR065459NICHD NIH HHS DP2 HD088158NIDDK NIH HHS R01 DK105542NIDDK NIH HHS R01 DK119186NIDDK NIH HHS R01 DK119192NIGMS NIH HHS T32 GM007270
6 · The paper itself

Abstract

Compartmentalization of macromolecules is a ubiquitous molecular mechanism that drives numerous cellular functions. The appropriate organization of enzymes in space and time enables the precise transmission and integration of intracellular signals. Molecular scaffolds constrain signaling enzymes to influence the regional modulation of these physiological processes. Mitochondrial targeting of protein kinases and protein phosphatases provides a means to locally control the phosphorylation status and action of proteins on the surface of this organelle. Dual-specificity protein kinase A anchoring protein 1 (dAKAP1) is a multivalent binding protein that targets protein kinase A (PKA), RNAs, and other signaling enzymes to the outer mitochondrial membrane. Many AKAPs recruit a diverse set of binding partners that coordinate a broad range of cellular processes. Here, results of MS and biochemical analyses reveal that dAKAP1 anchors additional components, including the ribonucleoprotein granule components La-related protein 4 (LARP4) and polyadenylate-binding protein 1 (PABPC1). Local translation of mRNAs at organelles is a means to spatially control the synthesis of proteins. RNA-Seq data demonstrate that dAKAP1 binds mRNAs encoding proteins required for mitochondrial metabolism, including succinate dehydrogenase. Functional studies suggest that the loss of dAKAP1-RNA interactions reduces mitochondrial electron transport chain activity. Hence, dAKAP1 plays a previously unappreciated role as a molecular interface between second messenger signaling and local protein synthesis machinery.

Indexed as

Protein BiosynthesisSecond Messenger SystemsA Kinase Anchor ProteinsAutoantigensCyclic AMP-Dependent Protein KinasesElectron Transport Chain Complex ProteinsHEK293 CellsHumansMitochondriaMitochondrial MembranesPoly(A)-Binding Protein IRibonucleoproteinsRNA-SeqSS-B AntigenAKAP1 protein, humanA Kinase Anchor ProteinsAutoantigensCyclic AMP-Dependent Protein KinasesElectron Transport Chain Complex ProteinsPoly(A)-Binding Protein IRibonucleoproteinsSS-B AntigenA-kinase anchoring proteins (AKAPs)intracellular compartmentalizationlocal signaling complexesmitochondriamitochondrial respiratory chain complexmolecular scaffoldprotein kinase A (PKA)protein kinasesRNA–protein interactiontranslation regulation

Identifiers

PMID32482893
PMCPMC7397098
OpenAlexW3029804467

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.