Evidence map›Paper›PMID 32482889›Full record

ArticleThe Journal of biological chemistry2020

The polycomb group protein PCGF6 mediates germline gene silencing by recruiting histone-modifying proteins to target gene promoters.

Mengjie Liu, Yaru Zhu, Fei Xing, Shuang Liu, Yin Xia, Qing Jiang, Jinzhong Qin

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
1.8field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 52 citations in OpenAlex.

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  13. PRC1 uncomplexed.Stem cell reports · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 2 countries.

Mengjie LiuState Key Laboratory of Pharmaceutical Biotechnology and MOE Key Laboratory of Model Animals for Disease Study, Model Animal Research Center, Nanjing University, Nanjing, China.ORCID 0000-0003-0713-1006
Yaru ZhuState Key Laboratory of Pharmaceutical Biotechnology and MOE Key Laboratory of Model Animals for Disease Study, Model Animal Research Center, Nanjing University, Nanjing, China.
Fei XingCollege of Animal Science and Technology, Nanjing Agricultural University, Nanjing, China.
Shuang LiuState Key Laboratory of Pharmaceutical Biotechnology and MOE Key Laboratory of Model Animals for Disease Study, Model Animal Research Center, Nanjing University, Nanjing, China.
Yin XiaSchool of Biomedical Sciences, Chinese University of Hong Kong, Hong Kong, China.ORCID 0000-0003-0315-7532
Qing JiangDepartment of Sports Medicine and Adult Reconstructive Surgery, Nanjing Drum Tower Hospital Affiliated to Medical School of Nanjing University, Nanjing, China.ORCID 0000-0002-2552-9686
Jinzhong QinState Key Laboratory of Pharmaceutical Biotechnology and MOE Key Laboratory of Model Animals for Disease Study, Model Animal Research Center, Nanjing University, Nanjing, China qinjz@nicemice.cn.
Model Animal Research Center · CNChinese University of Hong Kong · HKNanjing Agricultural University · CNNanjing Drum Tower Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Polycomb group (PcG) proteins are essential for maintenance of lineage fidelity by coordinating developmental gene expression programs. Polycomb group ring finger 6 (PCGF6) has been previously reported to repress expression of lineage-specific genes, especially germ cell-related genes in mouse embryonic stem cells (ESCs) via the noncanonical polycomb repressive complex PRC1.6. However, the molecular mechanism of this repression remains largely unknown. Here, using RNA-Seq, real-time RT-PCR, immunohistochemistry, immunoprecipitation, and ChIP analyses, we demonstrate that PCGF6 plays an essential role in embryonic development, indicated by the partially penetrant embryonic lethality in homozygous PCGF6 (

Indexed as

Gene SilencingAnimalsCell LineHistone Deacetylase 1Histone Deacetylase 2Histone-Lysine N-MethyltransferaseHistonesMiceMice, KnockoutMouse Embryonic Stem CellsPolycomb Repressive Complex 1RNA-SeqGLP protein, mouseHdac1 protein, mouseHdac2 protein, mouseHistone Deacetylase 1Histone Deacetylase 2Histone-Lysine N-MethyltransferaseHistonesPcgf6 protein, mousePolycomb Repressive Complex 1embryonic stem cellembryonic stem cellsepigenetic regulationG9a/GlpG9A histone methyltransferaseG9a-like protein 1 (Glp)gene knockoutgene regulationgermline gene silencinghistone deacetylase 1/2 (Hdac1/2)histone deacetylase (HDAC)histone methylationknockout micePcgf6polycombpolycomb group ring finger 6 (Pcgf6)PRC1.6

Identifiers

PMID32482889
PMCPMC7363147
OpenAlexW3029267962

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.