Evidence map›Paper›PMID 32482161›Full record

ArticleBMC genomics2020

Disequilibrium evolution of the Fructose-1,6-bisphosphatase gene family leads to their functional biodiversity in Gossypium species.

Qún Gě, Yànli Cūi, Jùnwén Lǐ, Jǔwǔ Gōng, Quánwěi Lú, Péngtāo Lǐ, Yùzhēn Shí, Hǎihóng Shāng, Àiyīng Liú, Xiǎoyīng Dèng and 4 more

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
3.7field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 26 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 3 institutions in 1 country.

Qún GěCollege of Agriculture, Engineering Research Centre of Cotton of Ministry of Education, Xinjiang Agricultural University, Urumqi, China, 311 Nongda East Road, Urumqi, 830052, China.
Yànli CūiCollege of Agriculture, Engineering Research Centre of Cotton of Ministry of Education, Xinjiang Agricultural University, Urumqi, China, 311 Nongda East Road, Urumqi, 830052, China.
Jùnwén LǐState Key Laboratory of Cotton Biology, Institute of Cotton Research, Chinese Academy of Agricultural Sciences, Anyang, China.
Jǔwǔ GōngCollege of Agriculture, Engineering Research Centre of Cotton of Ministry of Education, Xinjiang Agricultural University, Urumqi, China, 311 Nongda East Road, Urumqi, 830052, China.
Quánwěi LúState Key Laboratory of Cotton Biology, Institute of Cotton Research, Chinese Academy of Agricultural Sciences, Anyang, China.
Péngtāo LǐState Key Laboratory of Cotton Biology, Institute of Cotton Research, Chinese Academy of Agricultural Sciences, Anyang, China.
Yùzhēn ShíState Key Laboratory of Cotton Biology, Institute of Cotton Research, Chinese Academy of Agricultural Sciences, Anyang, China.
Hǎihóng ShāngState Key Laboratory of Cotton Biology, Institute of Cotton Research, Chinese Academy of Agricultural Sciences, Anyang, China.
Àiyīng LiúState Key Laboratory of Cotton Biology, Institute of Cotton Research, Chinese Academy of Agricultural Sciences, Anyang, China.
Xiǎoyīng DèngState Key Laboratory of Cotton Biology, Institute of Cotton Research, Chinese Academy of Agricultural Sciences, Anyang, China.
Jìngtāo PānState Key Laboratory of Cotton Biology, Institute of Cotton Research, Chinese Academy of Agricultural Sciences, Anyang, China.
Qúanjiā ChénCollege of Agriculture, Engineering Research Centre of Cotton of Ministry of Education, Xinjiang Agricultural University, Urumqi, China, 311 Nongda East Road, Urumqi, 830052, China. chqjia@126.com.
Yǒulù YuánCollege of Agriculture, Engineering Research Centre of Cotton of Ministry of Education, Xinjiang Agricultural University, Urumqi, China, 311 Nongda East Road, Urumqi, 830052, China. yuanyoulu@caas.cn.
Wànkuí GǒngState Key Laboratory of Cotton Biology, Institute of Cotton Research, Chinese Academy of Agricultural Sciences, Anyang, China. gongwankui@caas.cn.
Chinese Academy of Agricultural Sciences · CNCotton Research Institute · CNXinjiang Agricultural University · CN

Funding

National Key R&D Program of China 2017YFD0101603, 2016YFD0100500, 2016YFD0101401the Agricultural Science and Technology Innovation Program for CAAS CAAS-ASTIP-ICRCAASthe Natural Science Foundation of China 31801404
6 · The paper itself

Abstract

backgroundFructose-1,6-bisphosphatase (FBP) is a key enzyme in the plant sucrose synthesis pathway, in the Calvin cycle, and plays an important role in photosynthesis regulation in green plants. However, no systemic analysis of FBPs has been reported in Gossypium species.

resultsA total of 41 FBP genes from four Gossypium species were identified and analyzed. These FBP genes were sorted into two groups and seven subgroups. Results revealed that FBP family genes were under purifying selection pressure that rendered FBP family members as being conserved evolutionarily, and there was no tandem or fragmental DNA duplication in FBP family genes. Collinearity analysis revealed that a FBP gene was located in a translocated DNA fragment and the whole FBP gene family was under disequilibrium evolution that led to a faster evolutionary progress of the members in G. barbadense and in A

conclusionThe FBP gene family displayed a disequilibrium evolution pattern in Gossypium species, which led to diversified functions affecting not only fiber development, but also responses to Verticillium wilt and salt stress. All of these findings provide the foundation for further study of the function of FBP genes in cotton fiber development and in environmental adaptability.

Indexed as

Evolution, MolecularAdaptation, PhysiologicalEnvironmentFructose-BisphosphataseGene Expression Regulation, DevelopmentalGossypiumLinkage DisequilibriumMultigene FamilyPhylogenyPromoter Regions, GeneticSelection, GeneticStress, PhysiologicalFructose-BisphosphataseCottonEvolutionExpression patternsFructose-1, 6-bisphosphataseTranslocation

Identifiers

PMID32482161
PMCPMC7262775
OpenAlexW3032329778

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.