Evidence map›Paper›PMID 32478153›Full record

ArticleData in brief2020

Data relating to sequencing statistics and the reads and genomic coverage aligning to Taenia solium in the cerebrospinal fluid.

Xiaofei Fei, Chaoyang Li, Yun Zhang, Hongya Zhang, Xuewu Liu, Xinchao Ji, Yajun Shi, Na Liu, Mengli Wu, Fang Du and 12 more

Open access · goldAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Data in brief, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.4field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 3 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors at 3 institutions in 1 country.

Xiaofei FeiDepartment of Neurology, Xijing Hospital, The Fourth Military Medical University, 15 Changle xi Road, Xi'an 710032, China.
Chaoyang LiDepartment of Neurology, Xijing Hospital, The Fourth Military Medical University, 15 Changle xi Road, Xi'an 710032, China.
Yun ZhangDepartment of Neurology, Xijing Hospital, The Fourth Military Medical University, 15 Changle xi Road, Xi'an 710032, China.
Hongya ZhangDepartment of Neurology, Xijing Hospital, The Fourth Military Medical University, 15 Changle xi Road, Xi'an 710032, China.
Xuewu LiuDepartment of Neurology, Xijing Hospital, The Fourth Military Medical University, 15 Changle xi Road, Xi'an 710032, China.
Xinchao JiDepartment of Neurology, Xijing Hospital, The Fourth Military Medical University, 15 Changle xi Road, Xi'an 710032, China.
Yajun ShiDepartment of Neurology, Xijing Hospital, The Fourth Military Medical University, 15 Changle xi Road, Xi'an 710032, China.
Na LiuDepartment of Neurology, Xijing Hospital, The Fourth Military Medical University, 15 Changle xi Road, Xi'an 710032, China.
Mengli WuDepartment of Neurology, Xijing Hospital, The Fourth Military Medical University, 15 Changle xi Road, Xi'an 710032, China.
Fang DuDepartment of Neurology, Xijing Hospital, The Fourth Military Medical University, 15 Changle xi Road, Xi'an 710032, China.
Yining YangDepartment of Neurology, Xijing Hospital, The Fourth Military Medical University, 15 Changle xi Road, Xi'an 710032, China.
Wen DaiDepartment of Neurology, Xijing Hospital, The Fourth Military Medical University, 15 Changle xi Road, Xi'an 710032, China.
TingTing LiuDepartment of Neurology, Xijing Hospital, The Fourth Military Medical University, 15 Changle xi Road, Xi'an 710032, China.
Ying HeDepartment of Neurology, Xijing Hospital, The Fourth Military Medical University, 15 Changle xi Road, Xi'an 710032, China.
Ting BianDepartment of Neurology, Xijing Hospital, The Fourth Military Medical University, 15 Changle xi Road, Xi'an 710032, China.
Huimin ZhouDepartment of Neurology, Xijing Hospital, The Fourth Military Medical University, 15 Changle xi Road, Xi'an 710032, China.
Xingyue AnDepartment of Neurology, Xijing Hospital, The Fourth Military Medical University, 15 Changle xi Road, Xi'an 710032, China.
Zheng CaiDepartment of Neurology, Xijing Hospital, The Fourth Military Medical University, 15 Changle xi Road, Xi'an 710032, China.
Jian ShiDepartment of Neurology, The First Affiliated Hospital Of Henan University Of Science and Technology, Luoyang, Henan, China.
Guodong FengDepartment of Neurology, Zhongshan Hospital, Fudan University, 180 Fenglin Road, Shanghai 200032, China.
Ming ShiDepartment of Neurology, Xijing Hospital, The Fourth Military Medical University, 15 Changle xi Road, Xi'an 710032, China.
Gang ZhaoDepartment of Neurology, Xijing Hospital, The Fourth Military Medical University, 15 Changle xi Road, Xi'an 710032, China.
Xijing Hospital · CNFirst Affiliated Hospital of Henan University of Science and Technology · CNFudan University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

This data can serve as a reference for other next-generation sequencing (NGS) of the cerebrospinal fluid (CSF). In the related research article, entitled "Next-Generation Sequencing of Cerebrospinal Fluid for the Diagnosis of Neurocysticercosis", we reported NGS of the CSF might be an auxiliary method for neurocysticercosis (NCC) patients who have complicated manifestations and courses to receive early diagnosis and treatment. In this article, we retrieved the available data about the sequencing statistics of the CSF samples and the number of unique reads and genomic coverage aligning to microorganic sequences. The data were generated by the Illumina MiniSeq system for sequencing and computational subtraction of the human host sequences was performed. Finally, the remaining sequencing data were aligned to the Microbial Genome Databases. This data can serve as a reference for other NGS of the CSF.

Indexed as

DNA Sequence AnalysesHigh-Throughput Nucleotide SequencingSequence AnalysisTaenia solium

Identifiers

PMID32478153
PMCPMC7248648
OpenAlexW3024204040

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.