Evidence map›Paper›PMID 32477961›Full record

ArticleFrontiers in cellular and infection microbiology2020

Significant Short-Term Shifts in the Microbiomes of Smokers With Periodontitis After Periodontal Therapy With Amoxicillin & Metronidazole as Revealed by 16S rDNA Amplicon Next Generation Sequencing.

Daniel Hagenfeld, Johannes Matern, Karola Prior, Inga Harks, Peter Eickholz, Katrin Lorenz, Ti-Sun Kim, Thomas Kocher, Jörg Meyle, Doğan Kaner and 3 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in cellular and infection microbiology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.8field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
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  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 8 institutions in 1 country.

Daniel HagenfeldDepartment of Periodontology and Operative Dentistry, Münster University Hospital, Münster, Germany.
Johannes MaternDepartment of Periodontology and Operative Dentistry, Münster University Hospital, Münster, Germany.
Karola PriorDepartment of Periodontology and Operative Dentistry, Münster University Hospital, Münster, Germany.
Inga HarksDepartment of Periodontology and Operative Dentistry, Münster University Hospital, Münster, Germany.
Peter EickholzDepartment of Periodontology, Johann Wolfgang Goethe-University Frankfurt, Frankfurt, Germany.
Katrin LorenzDepartment of Periodontology, TU Dresden, Dresden, Germany.
Ti-Sun KimSection of Periodontology, Department of Conservative Dentistry, University Hospital Heidelberg, Heidelberg, Germany.
Thomas KocherUnit of Periodontology, University Medicine Greifswald, Greifswald, Germany.
Jörg MeyleDepartment of Periodontology, University of Giessen, Giessen, Germany.
Doğan KanerDepartment of Periodontology, Dental School, Faculty of Health, University of Witten/Herdecke, Witten, Germany.
Ulrich SchlagenhaufDepartment of Periodontology, University Hospital Würzburg, Würzburg, Germany.
Dag HarmsenDepartment of Periodontology and Operative Dentistry, Münster University Hospital, Münster, Germany.
Benjamin EhmkeDepartment of Periodontology and Operative Dentistry, Münster University Hospital, Münster, Germany.
University Hospital Münster · DECharité - Universitätsmedizin Berlin · DEGiessen School of Theology · DEGoethe University Frankfurt · DEHeidelberg University · DETU Dresden · DEUniversitätsklinikum Würzburg · DEUniversitätsmedizin Greifswald · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The aim of this follow-up study was, to compare the effects of mechanical periodontal therapy with or without adjunctive amoxicillin and metronidazole on the subgingival microbiome of smokers with periodontitis using 16S rDNA amplicon next generation sequencing. Fifty-four periodontitis patients that smoke received either non-surgical periodontal therapy with adjunctive amoxicillin and metronidazole (n = 27) or with placebos (n = 27). Subgingival plaque samples were taken before and two months after therapy. Bacterial genomic DNA was isolated and the V4 hypervariable region of the bacterial 16S rRNA genes was amplified. Up to 96 libraries were normalized and pooled for Illumina MiSeq paired-end sequencing with almost fully overlapping 250 base pairs reads. Exact ribosomal sequence variants (RSVs) were inferred with DADA2. Microbial diversity and changes on the genus and RSV level were analyzed with non-parametric tests and a negative binomial regression model, respectively. Before therapy, the demographic, clinical, and microbial parameters were not significantly different between the placebo and antibiotic groups. Two months after the therapy, clinical parameters improved and there was a significantly increased dissimilarity of microbiomes between the two groups. In the antibiotic group, there was a significant reduction of genera classified as

Indexed as

MicrobiotaPeriodontitisSmokersAmoxicillinAnti-Bacterial AgentsDNA, RibosomalFollow-Up StudiesHigh-Throughput Nucleotide SequencingHumansMetronidazoleRNA, Ribosomal, 16SAmoxicillinAnti-Bacterial AgentsDNA, RibosomalMetronidazoleRNA, Ribosomal, 16S16S rDNA amplicon sequencingmicrobiotaperiodontal therapysmokingsystemic antibiotics

Identifiers

PMID32477961
PMCPMC7232543
OpenAlexW3023307205

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.