Evidence map›Paper›PMID 32477693›Full record

ArticleAMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science2020

A deep-learning based system for accurate extraction of blood pressure data in clinical narratives.

Tianyi Xie, Yi Zhen, Maryam Tavakoli, Gregory Hundley, Yaorong Ge

Abstract read
In one paragraph

Article in AMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Tianyi XieUniversity of North Carolina at Charlotte, Charlotte, NC, USA.
Yi ZhenUniversity of North Carolina at Charlotte, Charlotte, NC, USA.
Maryam TavakoliUniversity of North Carolina at Charlotte, Charlotte, NC, USA.
Gregory HundleyUniversity of North Carolina at Charlotte, Charlotte, NC, USA.
Yaorong GeUniversity of North Carolina at Charlotte, Charlotte, NC, USA.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

This study presents a novel workflow for identifying and analyzing blood pressure readings in clinical narratives using a Convolution Neural Network. The network performs three tasks: identifying blood pressure readings, determining the exactness of the readings, and then classifying the readings into three classes: general, treatment, and suggestion. The system can be easily set up and deployed by people who are not experts in clinical Natural Language Processing. The validation results on an independent test set show the first two of the three tasks achieve a precision, recall, and F-measure over or close to 95%, and the third task achieves an overall accuracy of 85.4%. The study demonstrates that the proposed workflow is effective for extracting blood pressure data in clinical notes. The workflow is general and can be easily adapted to analyze other clinical concepts for phenotyping tasks.

Identifiers

PMID32477693
PMCPMC7233038

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.