Evidence map›Paper›PMID 32477687›Full record

ArticleAMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science2020

Can Neo4j Replace PostgreSQL in Healthcare?

Jessica A M Stothers, Andrew Nguyen

Abstract read
In one paragraph

Article in AMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. The importance of graph databases and graph learning for clinical applications.Database : the journal of biological databases and curation · 2023
    Review
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Jessica A M StothersUniversity of San Francisco, San Francisco, CA.
Andrew NguyenUniversity of San Francisco, San Francisco, CA.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Our current big data landscape prompts us to develop new analytical skills in order to make the best use of the abundance of datasets at hand. Traditionally, SQL databases such as PostgreSQL have been the databases of choice, and newer graph databases such as Neo4j have been relegated to the analysis of social network and transportation datasets. In this paper, we conduct a side by side comparison of PostgreSQL (using SQL) and Neo4j (using Cypher) using the MIMIC-III patient database as a case study. We found that, while Neo4j is more time intensive to implement, its queries are less complex and have a faster runtime than comparable queries performed in PostgreSQL. This leads to the conclusion that while PostgreSQL is adequate as a database, Neo4j should be considered a viable contender for health data storage and analysis.

Identifiers

PMID32477687
PMCPMC7233060

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.