Evidence map›Paper›PMID 32477685›Full record

ArticleAMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science2020

Paraphrasing to improve the performance of Electronic Health Records Question Answering.

Sarvesh Soni, Kirk Roberts

Abstract read
In one paragraph

Article in AMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Sarvesh SoniSchool of Biomedical Informatics, University of Texas Health Science Center at Houston, Houston TX, USA.
Kirk RobertsSchool of Biomedical Informatics, University of Texas Health Science Center at Houston, Houston TX, USA.

Funding

Natural Language Question Understanding for Electronic Health RecordsR00LM012104 · NLM · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI ROBERTS, KIRK EDWARD · 2016 to 2018
$747k
NLM NIH HHS R00 LM012104
6 · The paper itself

Abstract

This paper describes a paraphrasing approach to improve the performance of question answering (QA) for electronic health records (EHRs). QA systems for structured EHR data usually rely on semantic parsing, which aims to generate machine-understandable logical forms from free-text questions. Training semantic parsers requires large datasets of question-logical form (QL) pairs, which are labor-intensive to create. Considering the scarcity of large QL datasets in the clinical domain, we propose a framework for expanding an existing dataset using paraphrasing. We experiment with different heuristics for multiple sample sizes and iterations to assess the effect of adding paraphrasing to the task of semantic parsing. We found that adding paraphrases to an existing dataset based on TERTHRESHOLD scores results in an improved performance in the majority (74%) of the experimental runs. Hence, the proposed paraphrasing-based framework has the potential to improve the performance of QA systems using a limited set of existing QL annotations.

Identifiers

PMID32477685
PMCPMC7233085

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.